Experiment ID: 975

Field Description
namemicrobiomes of hadal fishes across trench habitats contain similar taxa and known piezophiles
sraprjna720542
doihttps://doi.org/10.1128/msphere.00032-22
datamd58188dbddb22a9b41961e97712460767a
mapmd5b8c6e8680fc11b626c0b431f44642c5b

Annotations for experiment:

term enrichment score
TermScore
isla coronado norte0.500000
gut content0.400000
depth (water) 5000-10000m0.363636
hadal snailfish0.363636
depth (water) 500-1000m0.296296
hindgut0.285714
stomiidae0.222222
dragonfish0.222222
careproctus melanurus0.222222
depth (water) 100-500m0.222222
snailfish0.222222
myctophidae0.222222
lanternfish0.222222
gonostomatidae <vertebrata>0.222222
bristlemouths0.222222
argyropelecus affinis0.222222
hatchetfish0.222222
kermadec trench0.222222
notoliparis kermadecensis0.222222
marinas trench0.222222
pseudoliparis swirei0.222222
san diego0.166667
fish0.117647
pacific ocean0.090909
intestine0.062500
Fraction of dbbact annotations with this term covered by the query
TermScore
stomiidae0.500000
dragonfish0.500000
careproctus melanurus0.500000
depth (water) 100-500m0.500000
snailfish0.500000
isla coronado norte0.500000
myctophidae0.500000
lanternfish0.500000
gonostomatidae <vertebrata>0.500000
bristlemouths0.500000
argyropelecus affinis0.500000
hatchetfish0.500000
kermadec trench0.500000
notoliparis kermadecensis0.500000
depth (water) 5000-10000m0.500000
hadal snailfish0.500000
marinas trench0.500000
pseudoliparis swirei0.500000
gut content0.250000
depth (water) 500-1000m0.200000
san diego0.200000
hindgut0.166667
fish0.062500
pacific ocean0.047619
intestine0.032258
Fraction of annotations for the query sequences containing the term
TermScore
intestine1.000000
hindgut1.000000
pacific ocean1.000000
fish1.000000
gut content1.000000
depth (water) 500-1000m0.571429
isla coronado norte0.500000
depth (water) 5000-10000m0.285714
hadal snailfish0.285714
stomiidae0.142857
dragonfish0.142857
san diego0.142857
careproctus melanurus0.142857
depth (water) 100-500m0.142857
snailfish0.142857
myctophidae0.142857
lanternfish0.142857
gonostomatidae <vertebrata>0.142857
bristlemouths0.142857
argyropelecus affinis0.142857
hatchetfish0.142857
kermadec trench0.142857
notoliparis kermadecensis0.142857
marinas trench0.142857
pseudoliparis swirei0.142857
Number of experiments associating the term to the sequence
TermScore
intestine1.000000
hindgut1.000000
pacific ocean1.000000
fish1.000000
gut content1.000000
stomiidae1.000000
depth (water) 500-1000m1.000000
dragonfish1.000000
san diego1.000000
careproctus melanurus1.000000
depth (water) 100-500m1.000000
snailfish1.000000
isla coronado norte1.000000
myctophidae1.000000
lanternfish1.000000
gonostomatidae <vertebrata>1.000000
bristlemouths1.000000
argyropelecus affinis1.000000
hatchetfish1.000000
kermadec trench1.000000
notoliparis kermadecensis1.000000
depth (water) 5000-10000m1.000000
hadal snailfish1.000000
marinas trench1.000000
pseudoliparis swirei1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
975amnondominant intestine, hindgut, pacific ocean, fish, gut content, marinas trench, pseudoliparis swirei, depth (water) 5000-10000m, hadal snailfish2022-12-24v41 / 6approvedNo
975amnondominant intestine, hindgut, pacific ocean, san diego, fish, gut content, careproctus melanurus, depth (water) 100-500m, snailfish2022-12-24v41 / 7approvedNo
975amnondominant intestine, hindgut, pacific ocean, fish, gut content, kermadec trench, notoliparis kermadecensis, depth (water) 5000-10000m, hadal snailfish2022-12-24v41 / 7approvedNo
975amnondominant intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, stomiidae, depth (water) 500-1000m, dragonfish2022-12-24v41 / 8approvedNo
975amnondominant intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, gonostomatidae <vertebrata>, depth (water) 500-1000m, bristlemouths2022-12-24v41 / 11approvedNo
975amnoncommon intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, argyropelecus affinis, depth (water) 500-1000m, hatchetfish2022-12-24v41 / 12approvedNo
975amnoncommon intestine, hindgut, pacific ocean, fish, gut content, marinas trench, pseudoliparis swirei, depth (water) 5000-10000m, hadal snailfish2022-12-24v41 / 13approvedNo
975amnondominant intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, myctophidae, depth (water) 500-1000m, lanternfish2022-12-24v41 / 15approvedNo
975amnoncommon intestine, hindgut, pacific ocean, fish, gut content, kermadec trench, notoliparis kermadecensis, depth (water) 5000-10000m, hadal snailfish2022-12-24v41 / 17approvedNo
975amnondominant intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, argyropelecus affinis, depth (water) 500-1000m, hatchetfish2022-12-24v41 / 18approvedNo
975amnoncommon intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, gonostomatidae <vertebrata>, depth (water) 500-1000m, bristlemouths2022-12-24v41 / 27approvedNo
975amnoncommon intestine, hindgut, pacific ocean, fish, gut content, isla coronado norte, myctophidae, depth (water) 500-1000m, lanternfish2022-12-24v41 / 54approvedNo
975amnoncommon intestine, hindgut, pacific ocean, san diego, fish, gut content, careproctus melanurus, depth (water) 100-500m, snailfish2022-12-24v41 / 71approvedNo
975amnoncommon intestine, hindgut, pacific ocean, fish, gut content, stomiidae, depth (water) 500-1000m, dragonfish2022-12-24v41 / 226approvedNo

Problems / suggestions? Please visit the dbBact forum