Experiment ID: 975

Field Description
namemicrobiomes of hadal fishes across trench habitats contain similar taxa and known piezophiles
sraprjna720542
doihttps://doi.org/10.1128/msphere.00032-22
datamd58188dbddb22a9b41961e97712460767a
mapmd5b8c6e8680fc11b626c0b431f44642c5b

Annotations for experiment:

term enrichment score
TermScore
isla coronado norte0.400000
depth (water) 5000-10000m0.307692
hadal snailfish0.307692
gut content0.250000
stomiidae0.200000
dragonfish0.200000
depth (water) 100-500m0.200000
careproctus melanurus0.200000
snailfish0.200000
myctophidae0.200000
lanternfish0.200000
gonostomatidae <vertebrata>0.200000
bristlemouths0.200000
hatchetfish0.200000
argyropelecus affinis0.200000
notoliparis kermadecensis0.200000
kermadec trench0.200000
pseudoliparis swirei0.200000
marinas trench0.200000
depth (water) 500-1000m0.186047
hindgut0.166667
san diego0.125000
fish0.062500
pacific ocean0.047619
intestine0.032258
Fraction of dbbact annotations with this term covered by the query
TermScore
stomiidae0.333333
dragonfish0.333333
depth (water) 100-500m0.333333
careproctus melanurus0.333333
snailfish0.333333
isla coronado norte0.333333
myctophidae0.333333
lanternfish0.333333
gonostomatidae <vertebrata>0.333333
bristlemouths0.333333
hatchetfish0.333333
argyropelecus affinis0.333333
depth (water) 5000-10000m0.333333
notoliparis kermadecensis0.333333
hadal snailfish0.333333
kermadec trench0.333333
pseudoliparis swirei0.333333
marinas trench0.333333
gut content0.142857
depth (water) 500-1000m0.111111
san diego0.111111
hindgut0.090909
fish0.032258
pacific ocean0.024390
intestine0.016393
Fraction of annotations for the query sequences containing the term
TermScore
fish1.000000
pacific ocean1.000000
gut content1.000000
hindgut1.000000
intestine1.000000
depth (water) 500-1000m0.571429
isla coronado norte0.500000
depth (water) 5000-10000m0.285714
hadal snailfish0.285714
stomiidae0.142857
dragonfish0.142857
depth (water) 100-500m0.142857
careproctus melanurus0.142857
snailfish0.142857
san diego0.142857
myctophidae0.142857
lanternfish0.142857
gonostomatidae <vertebrata>0.142857
bristlemouths0.142857
hatchetfish0.142857
argyropelecus affinis0.142857
notoliparis kermadecensis0.142857
kermadec trench0.142857
pseudoliparis swirei0.142857
marinas trench0.142857
Number of experiments associating the term to the sequence
TermScore
fish1.000000
pacific ocean1.000000
gut content1.000000
hindgut1.000000
intestine1.000000
stomiidae1.000000
dragonfish1.000000
depth (water) 500-1000m1.000000
depth (water) 100-500m1.000000
careproctus melanurus1.000000
snailfish1.000000
san diego1.000000
isla coronado norte1.000000
myctophidae1.000000
lanternfish1.000000
gonostomatidae <vertebrata>1.000000
bristlemouths1.000000
hatchetfish1.000000
argyropelecus affinis1.000000
depth (water) 5000-10000m1.000000
notoliparis kermadecensis1.000000
hadal snailfish1.000000
kermadec trench1.000000
pseudoliparis swirei1.000000
marinas trench1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
975amnondominant marinas trench, pseudoliparis swirei, hadal snailfish, depth (water) 5000-10000m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v41 / 6approvedNo
975amnondominant kermadec trench, hadal snailfish, notoliparis kermadecensis, depth (water) 5000-10000m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v41 / 7approvedNo
975amnondominant san diego, snailfish, careproctus melanurus, depth (water) 100-500m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v41 / 7approvedNo
975amnondominant depth (water) 500-1000m, dragonfish, stomiidae, intestine, hindgut, gut content, pacific ocean, fish, isla coronado norte2022-12-24v41 / 8approvedNo
975amnondominant isla coronado norte, depth (water) 500-1000m, bristlemouths, gonostomatidae <vertebrata>, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v41 / 11approvedNo
975amnoncommon depth (water) 500-1000m, isla coronado norte, intestine, hindgut, gut content, hatchetfish, pacific ocean, fish, argyropelecus affinis2022-12-24v41 / 12approvedNo
975amnoncommon fish, pacific ocean, gut content, hindgut, intestine, depth (water) 5000-10000m, hadal snailfish, pseudoliparis swirei, marinas trench2022-12-24v41 / 13approvedNo
975amnondominant lanternfish, myctophidae, isla coronado norte, depth (water) 500-1000m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v41 / 15approvedNo
975amnoncommon fish, pacific ocean, gut content, hindgut, intestine, depth (water) 5000-10000m, notoliparis kermadecensis, hadal snailfish, kermadec trench2022-12-24v41 / 17approvedNo
975amnondominant depth (water) 500-1000m, isla coronado norte, intestine, hindgut, gut content, hatchetfish, pacific ocean, fish, argyropelecus affinis2022-12-24v41 / 18approvedNo
975amnoncommon fish, pacific ocean, gut content, hindgut, intestine, gonostomatidae <vertebrata>, bristlemouths, depth (water) 500-1000m, isla coronado norte2022-12-24v41 / 27approvedNo
975amnoncommon fish, pacific ocean, gut content, hindgut, intestine, depth (water) 500-1000m, isla coronado norte, myctophidae, lanternfish2022-12-24v41 / 54approvedNo
975amnoncommon fish, pacific ocean, gut content, hindgut, intestine, depth (water) 100-500m, careproctus melanurus, snailfish, san diego2022-12-24v41 / 71approvedNo
975amnoncommon fish, pacific ocean, gut content, hindgut, intestine, stomiidae, dragonfish, depth (water) 500-1000m2022-12-24v41 / 226approvedNo

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