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Experiment ID: 956

Field	Description
name	cooked common bean flour, but not its protein hydrolysate, has the potential to improve gut microbiota composition and function in balb/c mice fed a high-fat diet added with 6-propyl-2-thiouracil
sra	prjna658699
doi	https://doi.org/10.1016/j.jnutbio.2022.109022
datamd5	3c81616708cf631ac710b50360c33538
mapmd5	e0cdcc580f6c2002ea0b546339002203

Annotations for experiment:

term enrichment score

Term	Score
6-propyl-2-thiouracil	0.400000
bean flour diet	0.222222
LOWER IN no bean flour diet	0.222222
LOWER IN 6-propyl-2-thiouracil	0.222222
no bean flour diet	0.222222
LOWER IN bean flour diet	0.222222
balb/c	0.111111
high fat diet	0.064516
mouse chow	0.064516
LOWER IN high fat diet	0.060606
male organism	0.058824
LOWER IN mouse chow	0.051282
adult organism	0.047619
brazil	0.040000
caecum	0.020000
mouse	0.015152
mus musculus	0.013699
research facility	0.005236

Fraction of dbbact annotations with this term covered by the query

Term	Score
6-propyl-2-thiouracil	0.333333
bean flour diet	0.333333
LOWER IN no bean flour diet	0.333333
LOWER IN 6-propyl-2-thiouracil	0.333333
no bean flour diet	0.333333
LOWER IN bean flour diet	0.333333
balb/c	0.058824
LOWER IN high fat diet	0.037037
high fat diet	0.034483
mouse chow	0.034483
male organism	0.030303
LOWER IN mouse chow	0.030303
adult organism	0.024390
brazil	0.020408
caecum	0.010101
mouse	0.007634
mus musculus	0.006897
research facility	0.002625

Fraction of annotations for the query sequences containing the term

Term	Score
caecum	1.000000
research facility	1.000000
brazil	1.000000
adult organism	1.000000
male organism	1.000000
balb/c	1.000000
mus musculus	1.000000
mouse	1.000000
6-propyl-2-thiouracil	0.500000
high fat diet	0.500000
mouse chow	0.500000
bean flour diet	0.166667
LOWER IN no bean flour diet	0.166667
LOWER IN high fat diet	0.166667
LOWER IN 6-propyl-2-thiouracil	0.166667
LOWER IN mouse chow	0.166667
no bean flour diet	0.166667
LOWER IN bean flour diet	0.166667

Number of experiments associating the term to the sequence

Term	Score
6-propyl-2-thiouracil	1.000000
high fat diet	1.000000
caecum	1.000000
research facility	1.000000
brazil	1.000000
adult organism	1.000000
male organism	1.000000
balb/c	1.000000
mus musculus	1.000000
mouse	1.000000
bean flour diet	1.000000
LOWER IN no bean flour diet	1.000000
mouse chow	1.000000
LOWER IN high fat diet	1.000000
LOWER IN 6-propyl-2-thiouracil	1.000000
LOWER IN mouse chow	1.000000
no bean flour diet	1.000000
LOWER IN bean flour diet	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
956	amnon	high in no bean flour diet compared to bean flour diet in mouse mus musculus balb/c male organism adult organism brazil research facility caecum high fat diet 6-propyl-2-thiouracil	2022-12-17	v4	1 / 23	approved	No
956	amnon	dominant mouse chow, caecum, research facility, brazil, adult organism, male organism, balb/c, mus musculus, mouse	2022-12-17	v4	1 / 26	approved	No
956	amnon	high in 6-propyl-2-thiouracil high fat diet compared to mouse chow in caecum research facility brazil adult organism male organism balb/c mus musculus mouse	2022-12-17	v4	1 / 36	approved	No
956	amnon	high in mouse chow compared to high fat diet 6-propyl-2-thiouracil in mouse mus musculus balb/c male organism adult organism brazil research facility caecum	2022-12-17	v4	1 / 48	approved	No
956	amnon	common mouse, mus musculus, balb/c, male organism, adult organism, brazil, research facility, caecum, mouse chow	2022-12-17	v4	1 / 103	approved	No
956	amnon	high in bean flour diet compared to no bean flour diet in 6-propyl-2-thiouracil high fat diet caecum research facility brazil adult organism male organism balb/c mus musculus mouse	2022-12-17	v4	1 / 166	approved	No

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