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Experiment ID: 944

Field	Description
name	colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease
sra	prjna398187
doi	https://doi.org/10.1038/s41467-020-15342-5
datamd5	cf5ca695dd976e324cdbba5081c50bcf
mapmd5	0dbc28cc9397fa7b48cb1a69e942066a

Annotations for experiment:

term enrichment score

Term	Score
large intestine	0.666667
biopsy	0.200000
ireland	0.200000
LOWER IN crohn's disease	0.086022
ulcerative colitis	0.085837
LOWER IN ulcerative colitis	0.082474
crohn's disease	0.081218
LOWER IN control	0.008909
control	0.008840
adult	0.008163

Fraction of dbbact annotations with this term covered by the query

Term	Score
large intestine	0.500000
biopsy	0.111111
ireland	0.111111
LOWER IN crohn's disease	0.050000
LOWER IN ulcerative colitis	0.047619
ulcerative colitis	0.045455
crohn's disease	0.043478
LOWER IN control	0.004587
control	0.004484
adult	0.004098

Fraction of annotations for the query sequences containing the term

Term	Score
adult	1.000000
biopsy	1.000000
ireland	1.000000
large intestine	1.000000
ulcerative colitis	0.769231
crohn's disease	0.615385
control	0.307692
LOWER IN crohn's disease	0.307692
LOWER IN ulcerative colitis	0.307692
LOWER IN control	0.153846

Number of experiments associating the term to the sequence

Term	Score
control	1.000000
LOWER IN crohn's disease	1.000000
adult	1.000000
biopsy	1.000000
ireland	1.000000
large intestine	1.000000
LOWER IN ulcerative colitis	1.000000
ulcerative colitis	1.000000
LOWER IN control	1.000000
crohn's disease	1.000000

Search:

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
944	amnon	dominant control, adult, biopsy, ireland, large intestine	2022-11-26	v3	1 / 18	approved	No
944	amnon	dominant crohn's disease, adult, biopsy, ireland, large intestine, crohn's disease	2022-11-26	v3	1 / 19	approved	No
944	amnon	dominant ulcerative colitis, adult, biopsy, ireland, large intestine, ulcerative colitis	2022-11-26	v3	1 / 20	approved	No
944	amnon	high in crohn's disease crohn's disease compared to ulcerative colitis ulcerative colitis in adult biopsy ireland large intestine	2022-11-26	v3	1 / 22	approved	No
944	amnon	common crohn's disease, adult, biopsy, ireland, large intestine, crohn's disease	2022-11-26	v3	1 / 27	approved	No
944	amnon	high in ulcerative colitis ulcerative colitis compared to crohn's disease crohn's disease in adult biopsy ireland large intestine	2022-11-26	v3	1 / 36	approved	No
944	amnon	common ulcerative colitis, adult, biopsy, ireland, large intestine, ulcerative colitis	2022-11-26	v3	1 / 38	approved	No
944	amnon	common ulcerative colitis, adult, biopsy, ireland, large intestine, ulcerative colitis	2022-11-26	v3	1 / 38	approved	No
944	amnon	high in crohn's disease crohn's disease compared to control in adult biopsy ireland large intestine	2022-11-26	v3	1 / 54	approved	No
944	amnon	common control, adult, biopsy, ireland, large intestine	2022-11-26	v3	1 / 57	approved	No
944	amnon	high in ulcerative colitis ulcerative colitis compared to control in adult biopsy ireland large intestine	2022-11-26	v3	1 / 60	approved	No
944	amnon	high in control compared to ulcerative colitis ulcerative colitis in adult biopsy ireland large intestine	2022-11-26	v3	1 / 199	approved	No
944	amnon	high in control compared to crohn's disease crohn's disease in adult biopsy ireland large intestine	2022-11-26	v3	1 / 256	approved	No

Showing 1 to 13 of 13 entries

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