Experiment ID: 905

Field Description
namebacterial communities in the gastrointestinal tract segments of helminth-resistant and helminth-susceptible sheep
sraprjna674764
doihttps://doi.org/10.1186/s42523-022-00172-1
datamd5a054f7ffcec461ae2baff29d6082fb00
mapmd54f3b1b2a8054daadb710471ce670e28e

Annotations for experiment:

term enrichment score
TermScore
western australia0.500000
age 1 year0.200000
abomasum0.196078
LOWER IN abomasum0.171429
LOWER IN rumen0.092308
jejunum0.090090
LOWER IN jejunum0.084507
sheep0.066667
ovis aries0.058824
LOWER IN ileum0.053097
duodenum0.047619
ileum0.047393
LOWER IN colon0.041667
LOWER IN caecum0.040000
colon0.038835
rumen0.034364
australia0.032258
LOWER IN feces0.027778
caecum0.018957
research facility0.005236
feces0.002279
Fraction of dbbact annotations with this term covered by the query
TermScore
western australia0.333333
LOWER IN abomasum0.333333
abomasum0.200000
age 1 year0.111111
LOWER IN rumen0.076923
LOWER IN jejunum0.066667
jejunum0.058824
sheep0.034483
LOWER IN ileum0.034483
duodenum0.034483
ovis aries0.030303
LOWER IN colon0.028571
LOWER IN caecum0.027027
ileum0.027027
colon0.022222
rumen0.018868
LOWER IN feces0.016949
australia0.016393
caecum0.010101
research facility0.002625
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
ovis aries1.000000
australia1.000000
age 1 year1.000000
sheep1.000000
western australia1.000000
rumen0.192308
abomasum0.192308
jejunum0.192308
ileum0.192308
colon0.153846
caecum0.153846
feces0.153846
LOWER IN rumen0.115385
LOWER IN abomasum0.115385
LOWER IN jejunum0.115385
LOWER IN ileum0.115385
LOWER IN caecum0.076923
LOWER IN colon0.076923
LOWER IN feces0.076923
duodenum0.076923
Number of experiments associating the term to the sequence
TermScore
research facility1.000000
ovis aries1.000000
australia1.000000
age 1 year1.000000
sheep1.000000
western australia1.000000
rumen1.000000
abomasum1.000000
LOWER IN caecum1.000000
LOWER IN colon1.000000
LOWER IN feces1.000000
colon1.000000
caecum1.000000
feces1.000000
LOWER IN rumen1.000000
LOWER IN abomasum1.000000
LOWER IN jejunum1.000000
LOWER IN ileum1.000000
jejunum1.000000
ileum1.000000
duodenum1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
905amnondominant research facility, rumen, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 5approvedNo
905amnondominant research facility, abomasum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 8approvedNo
905amnondominant research facility, ileum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 9approvedNo
905amnondominant research facility, colon, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 9approvedNo
905amnondominant research facility, jejunum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 9approvedNo
905amnondominant research facility, caecum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 10approvedNo
905amnondominant feces, research facility, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 10approvedNo
905amnondominant research facility, duodenum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 15approvedNo
905amnon high in jejunum compared to ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 32approvedNo
905amnon high in ileum compared to jejunum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 61approvedNo
905amnon high in abomasum compared to rumen in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 78approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, jejunum2022-05-18v31 / 114approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, ileum2022-05-18v31 / 137approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, duodenum2022-05-18v31 / 200approvedNo
905amnon high in rumen compared to abomasum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 264approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, feces2022-05-18v31 / 401approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, caecum2022-05-18v31 / 417approvedNo
905amnoncommon sheep, ovis aries, australia, research facility, western australia, age 1 year, abomasum2022-05-18v31 / 460approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, colon2022-05-18v31 / 523approvedNo
905amnon high in ileum jejunum compared to rumen abomasum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 563approvedNo
905amnoncommon research facility, ovis aries, australia, age 1 year, sheep, western australia, rumen2022-05-18v31 / 597approvedNo
905amnon high in jejunum ileum compared to caecum colon feces in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 1092approvedNo
905amnon high in rumen abomasum compared to ileum jejunum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 2033approvedNo
905amnon high in caecum colon feces compared to jejunum ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 2246approvedNo
905amnon high in colon caecum feces compared to rumen abomasum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 2270approvedNo
905amnon high in rumen abomasum compared to caecum colon feces in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 2737approvedNo

Problems / suggestions? Please visit the dbBact forum