Experiment ID: 902

Field Description
namethe effects of signalment, diet, geographic location, season, and colitis associated with antimicrobial use or salmonella infection on the fecal microbiome of horses
sraprjna580257
doihttps://doi.org/10.1111/jvim.16206
datamd5c6958b3fa05f5a9a814a59b288303ae9
mapmd5b37b95a39e34a2afd7ddc96137e14b54

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN antibiotics induced colitis0.500000
LOWER IN salmonella gastroenteritis0.500000
antibiotics induced colitis0.500000
salmonella gastroenteritis0.333333
salmonellosis0.333333
LOWER IN salmonellosis0.250000
colitis0.142857
LOWER IN colitis0.125000
horse0.100000
equus caballus0.090909
LOWER IN antibiotic0.055556
antibiotic0.050000
adult organism0.047619
LOWER IN control0.004545
control0.004444
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
equus caballus1.000000
horse1.000000
adult organism1.000000
colitis0.600000
antibiotic0.500000
control0.400000
antibiotics induced colitis0.300000
salmonella gastroenteritis0.300000
salmonellosis0.300000
LOWER IN colitis0.200000
LOWER IN control0.200000
LOWER IN antibiotic0.100000
LOWER IN antibiotics induced colitis0.100000
LOWER IN salmonella gastroenteritis0.100000
LOWER IN salmonellosis0.100000
Number of experiments associating the term to the sequence
TermScore
control1.000000
LOWER IN colitis1.000000
LOWER IN antibiotic1.000000
LOWER IN antibiotics induced colitis1.000000
feces1.000000
united states of america1.000000
equus caballus1.000000
horse1.000000
adult organism1.000000
LOWER IN salmonella gastroenteritis1.000000
LOWER IN salmonellosis1.000000
colitis1.000000
antibiotic1.000000
antibiotics induced colitis1.000000
LOWER IN control1.000000
salmonella gastroenteritis1.000000
salmonellosis1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
902amnondominant feces, control, united states of america, equus caballus, horse, adult organism2022-05-02v41 / 3approvedNo
902amnondominant feces, united states of america, antibiotic, salmonella gastroenteritis, equus caballus, horse, adult organism, salmonellosis2022-05-02v41 / 13approvedNo
902amnondominant feces, united states of america, colitis, antibiotic, equus caballus, horse, adult organism, colitis, antibiotics induced colitis2022-05-02v41 / 16approvedNo
902amnoncommon feces, united states of america, colitis, antibiotic, equus caballus, horse, adult organism, colitis, antibiotics induced colitis2022-05-02v41 / 68approvedNo
902amnoncommon feces, united states of america, antibiotic, salmonella gastroenteritis, equus caballus, horse, adult organism, salmonellosis2022-05-02v41 / 158approvedNo
902amnon high in salmonella gastroenteritis salmonellosis compared to control in feces united states of america equus caballus horse adult organism 2022-05-02v41 / 226approvedNo
902amnoncommon feces, control, united states of america, equus caballus, horse, adult organism2022-05-02v41 / 350approvedNo
902amnon high in colitis antibiotic colitis antibiotics induced colitis compared to control in feces united states of america equus caballus horse adult organism 2022-05-02v41 / 364approvedNo
902amnon high in control compared to salmonella gastroenteritis salmonellosis in feces united states of america equus caballus horse adult organism 2022-05-02v41 / 679approvedNo
902amnon high in control compared to colitis antibiotic colitis antibiotics induced colitis in feces united states of america equus caballus horse adult organism 2022-05-02v41 / 1755approvedNo

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