Experiment ID: 817

Field Description
nameprofiling the airway in the macaque model of tuberculosis reveals variable microbial dysbiosis and alteration of community structure
sraprjna436553
doihttps://doi.org/10.1186/s40168-018-0560-y
datamd50602a3b728b146a8cc6a2549d1d29afb
mapmd5d829a9077eb81866e80e438a6f1f611d

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
cynomolgus macaque0.333333
macaca fascicularis0.333333
cheek pouch0.333333
LOWER IN lung0.333333
LOWER IN bronchoalveolar lavage0.333333
LOWER IN cheek pouch0.333333
LOWER IN oral wash0.142857
LOWER IN oral cavity0.090909
bronchoalveolar lavage0.076923
oral wash0.066667
lung0.052632
commonwealth of pennsylvania0.040000
oral cavity0.025641
LOWER IN saliva0.025641
captive0.015873
saliva0.007519
research facility0.002625
united states of america0.001669
Fraction of annotations for the query sequences containing the term
TermScore
cynomolgus macaque1.000000
macaca fascicularis1.000000
research facility1.000000
captive1.000000
commonwealth of pennsylvania1.000000
united states of america1.000000
oral wash0.500000
saliva0.500000
oral cavity0.500000
cheek pouch0.500000
lung0.500000
bronchoalveolar lavage0.500000
LOWER IN lung0.166667
LOWER IN bronchoalveolar lavage0.166667
LOWER IN oral cavity0.166667
LOWER IN cheek pouch0.166667
LOWER IN oral wash0.166667
LOWER IN saliva0.166667
Number of experiments associating the term to the sequence
TermScore
cynomolgus macaque1.000000
macaca fascicularis1.000000
research facility1.000000
captive1.000000
commonwealth of pennsylvania1.000000
oral wash1.000000
saliva1.000000
oral cavity1.000000
cheek pouch1.000000
united states of america1.000000
LOWER IN lung1.000000
LOWER IN bronchoalveolar lavage1.000000
LOWER IN oral cavity1.000000
LOWER IN cheek pouch1.000000
LOWER IN oral wash1.000000
LOWER IN saliva1.000000
lung1.000000
bronchoalveolar lavage1.000000

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