dbBact

Field	Description
name	bacterial community composition and assembly along a natural sodicity/salinity gradient in surface and subsurface soils
sra	prjna591962
doi	https://doi.org/10.1016/j.apsoil.2020.103731
datamd5	8e7b37d1f0f3bf1f4f35ba29ed9b9ec7
mapmd5	6adee287333c477da7f37c3211c27ca1

term enrichment score

Term	Score
songnen plain	0.666667
da'an station	0.666667
salic solonetz	0.666667
low sodicity	0.500000
high sodicity	0.500000
depth (soil) 80cm	0.400000
depth 0cm	0.400000
ph 10.5	0.368421
ph 9	0.352941
low salinity	0.333333
high salinity	0.333333
ph 8.5	0.294118
depth (soil) 40cm	0.250000
depth 20cm	0.222222
ph 10	0.200000
LOWER IN high sodicity	0.142857
LOWER IN depth (soil) 80cm	0.142857
LOWER IN depth 0cm	0.142857
LOWER IN low sodicity	0.142857
LOWER IN high salinity	0.125000
LOWER IN low salinity	0.125000
LOWER IN depth (soil) 0-20cm	0.100000
depth (soil) 0-20cm	0.086957
LOWER IN ph 10.5	0.076923
LOWER IN ph 10	0.076923
LOWER IN ph 8.5	0.076923
LOWER IN ph 9	0.076923
soil	0.019417
china	0.009434

Fraction of dbbact annotations with this term covered by the query

Term	Score
songnen plain	0.500000
da'an station	0.500000
salic solonetz	0.500000
low sodicity	0.500000
ph 8.5	0.500000
depth (soil) 80cm	0.500000
depth (soil) 40cm	0.500000
depth 0cm	0.500000
LOWER IN high sodicity	0.500000
LOWER IN ph 10.5	0.500000
LOWER IN ph 10	0.500000
LOWER IN depth (soil) 80cm	0.500000
LOWER IN depth 0cm	0.500000
high sodicity	0.500000
ph 10.5	0.500000
LOWER IN low sodicity	0.500000
LOWER IN ph 8.5	0.500000
ph 10	0.500000
LOWER IN ph 9	0.500000
depth 20cm	0.333333
ph 9	0.333333
low salinity	0.250000
LOWER IN high salinity	0.250000
high salinity	0.250000
LOWER IN low salinity	0.250000
LOWER IN depth (soil) 0-20cm	0.125000
depth (soil) 0-20cm	0.050000
soil	0.009804
china	0.004739

Fraction of annotations for the query sequences containing the term

Term	Score
soil	1.000000
china	1.000000
songnen plain	1.000000
da'an station	1.000000
salic solonetz	1.000000
low salinity	0.500000
low sodicity	0.500000
high salinity	0.500000
high sodicity	0.500000
ph 9	0.375000
depth (soil) 80cm	0.333333
depth 0cm	0.333333
depth (soil) 0-20cm	0.333333
ph 10.5	0.291667
ph 8.5	0.208333
depth 20cm	0.166667
depth (soil) 40cm	0.166667
ph 10	0.125000
LOWER IN high salinity	0.083333
LOWER IN high sodicity	0.083333
LOWER IN depth (soil) 80cm	0.083333
LOWER IN depth 0cm	0.083333
LOWER IN depth (soil) 0-20cm	0.083333
LOWER IN low salinity	0.083333
LOWER IN low sodicity	0.083333
LOWER IN ph 10.5	0.041667
LOWER IN ph 10	0.041667
LOWER IN ph 8.5	0.041667
LOWER IN ph 9	0.041667

Number of experiments associating the term to the sequence

Term	Score
soil	1.000000
depth 20cm	1.000000
low salinity	1.000000
china	1.000000
songnen plain	1.000000
da'an station	1.000000
salic solonetz	1.000000
low sodicity	1.000000
ph 8.5	1.000000
ph 9	1.000000
depth (soil) 80cm	1.000000
depth (soil) 40cm	1.000000
depth 0cm	1.000000
depth (soil) 0-20cm	1.000000
LOWER IN high salinity	1.000000
LOWER IN high sodicity	1.000000
LOWER IN ph 10.5	1.000000
LOWER IN ph 10	1.000000
LOWER IN depth (soil) 80cm	1.000000
LOWER IN depth 0cm	1.000000
LOWER IN depth (soil) 0-20cm	1.000000
high salinity	1.000000
high sodicity	1.000000
ph 10.5	1.000000
LOWER IN low salinity	1.000000
LOWER IN low sodicity	1.000000
LOWER IN ph 8.5	1.000000
ph 10	1.000000
LOWER IN ph 9	1.000000

Search:

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
791	sheryo	Dominant at 0cm depth in low saline low sodicity soil in China (dominant soil, depth 0cm, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 8.5, depth (soil) 0-20cm)	2021-06-08	v4	1 / 4	approved	No
791	sheryo	Dominant at 20cm depth in low saline low sodicity soil in China (dominant soil, depth 20cm, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 8.5, ph 9)	2021-06-08	v4	1 / 5	approved	No
791	sheryo	Dominant at 80cm depth in low saline low sodicity soil in China (dominant soil, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 9, depth (soil) 80cm)	2021-06-08	v4	1 / 5	approved	No
791	sheryo	Dominant at 40cm depth in low saline low sodicity soil in China (dominant soil, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 9, depth (soil) 40cm)	2021-06-08	v4	1 / 6	approved	No
791	sheryo	Dominant in highly saline sodic soil at 0cm depth in China (dominant soil, depth 0cm, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10.5, depth (soil) 0-20cm)	2021-06-07	v4	1 / 10	approved	No
791	sheryo	Dominant in highly saline sodic soil at 20cm depth in China (dominant soil, depth 20cm, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10.5)	2021-06-07	v4	1 / 20	approved	No
791	sheryo	Dominant in highly saline sodic soil at 40cm depth in China (dominant soil, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10.5, depth (soil) 40cm)	2021-06-07	v4	1 / 21	approved	No
791	sheryo	Dominant in highly saline sodic soil at8 80cm depth in China (dominant soil, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10, depth (soil) 80cm)	2021-06-07	v4	1 / 21	approved	No
791	sheryo	High at 80cm depth compared to 0cm depth in highly saline sodic soil in China ( high in depth (soil) 80cm compared to depth 0cm depth (soil) 0-20cm in soil high salinity china songnen plain da'an station salic solonetz high sodicity )	2021-06-07	v4	1 / 203	approved	No
791	sheryo	Common in highly saline sodic soil at8 80cm depth in China (common soil, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10, depth (soil) 80cm)	2021-06-07	v4	1 / 377	approved	No
791	sheryo	Higher in high sodicity and high salinity soil compared to low sodicity and low salinity soil at 80cm depth in China ( high in high salinity high sodicity ph 10 compared to low salinity low sodicity ph 9 in soil china songnen plain da'an station salic solonetz depth (soil) 80cm )	2021-06-08	v4	1 / 404	approved	No
791	sheryo	High at 0cm depth compared to 80cm depth in highly saline sodic soil in China ( high in depth 0cm depth (soil) 0-20cm compared to depth (soil) 80cm in soil high salinity china songnen plain da'an station salic solonetz high sodicity )	2021-06-07	v4	1 / 496	approved	No
791	sheryo	Common in highly saline sodic soil at 20cm depth in China (common soil, depth 20cm, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10.5)	2021-06-07	v4	1 / 596	approved	No
791	sheryo	Common in highly saline sodic soil at 40cm depth in China (common soil, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10.5, depth (soil) 40cm)	2021-06-07	v4	1 / 618	approved	No
791	sheryo	Common in highly saline sodic soil at 0cm depth in China (common soil, depth 0cm, high salinity, china, songnen plain, da'an station, salic solonetz, high sodicity, ph 10.5, depth (soil) 0-20cm)	2021-06-07	v4	1 / 648	approved	No
791	sheryo	Higher in high sodicity and high salinity soil compared to low sodicity and low salinity soil at 0cm depth in China ( high in high salinity high sodicity ph 10.5 compared to low salinity low sodicity ph 8.5 in soil depth 0cm china songnen plain da'an station salic solonetz depth (soil) 0-20cm )	2021-06-08	v4	1 / 670	approved	No
791	sheryo	Higher at 80cm depth compared to 0cm depth in low saline low sodicity soil in China ( high in depth (soil) 80cm compared to depth 0cm depth (soil) 0-20cm in soil low salinity china songnen plain da'an station salic solonetz low sodicity ph 9 )	2021-06-08	v4	1 / 675	approved	No
791	sheryo	Higher at 0cm depth compared to 80cm depth in low saline low sodicity soil in China ( high in depth 0cm depth (soil) 0-20cm compared to depth (soil) 80cm in soil low salinity china songnen plain da'an station salic solonetz low sodicity ph 9 )	2021-06-08	v4	1 / 748	approved	No
791	sheryo	Higher in low sodicity and low salinity soil compared to high sodicity and high salinity soil at 80cm depth in China ( high in low salinity low sodicity ph 9 compared to high salinity high sodicity ph 10 in soil china songnen plain da'an station salic solonetz depth (soil) 80cm )	2021-06-08	v4	1 / 895	approved	No
791	sheryo	Higher in low sodicity and low salinity soil compared to high sodicity and high salinity soil at 0cm depth in China ( high in low salinity low sodicity ph 8.5 compared to high salinity high sodicity ph 10.5 in soil depth 0cm china songnen plain da'an station salic solonetz depth (soil) 0-20cm )	2021-06-08	v4	1 / 932	approved	No
791	sheryo	Common at 0cm depth in low saline low sodicity soil in China (common soil, depth 0cm, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 8.5, depth (soil) 0-20cm)	2021-06-07	v4	1 / 1035	approved	No
791	sheryo	Common at 40cm depth in low saline low sodicity soil in China (common soil, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 9, depth (soil) 40cm)	2021-06-08	v4	1 / 1085	approved	No
791	sheryo	Common at 80cm depth in low saline low sodicity soil in China (common soil, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 9, depth (soil) 80cm)	2021-06-08	v4	1 / 1128	approved	No
791	sheryo	Common at 20cm depth in low saline low sodicity soil in China (common soil, depth 20cm, low salinity, china, songnen plain, da'an station, salic solonetz, low sodicity, ph 8.5, ph 9)	2021-06-08	v4	1 / 1155	approved	No

Showing 1 to 24 of 24 entries

This is the development server

Experiment ID: 791

Annotations for experiment: