dbBact

This is the development server

Experiment ID: 78

Field	Description
name	the role of social connectivity in gut microbial transmission and consequences for pathogen defense
qiita	10323
datamd5	f69b5c103ba4d21d22f50d36faacdcdb
mapmd5	ba582800e130471384d7d059ce6b67d9

Annotations for experiment:

term enrichment score

Term	Score
nanger granti	0.666667
tropical grassland biome	0.666667
gazelle	0.666667
kenya	0.333333
old age	0.153846
LOWER IN young age	0.153846
LOWER IN old age	0.133333
young age	0.133333
age	0.083333
LOWER IN male	0.062500
LOWER IN female	0.057143
male	0.035714
female	0.023256
feces	0.004577

Fraction of dbbact annotations with this term covered by the query

Term	Score
nanger granti	0.500000
tropical grassland biome	0.500000
gazelle	0.500000
kenya	0.200000
old age	0.142857
LOWER IN young age	0.142857
LOWER IN old age	0.111111
young age	0.111111
age	0.047619
LOWER IN male	0.038462
LOWER IN female	0.034483
male	0.020000
female	0.012500
feces	0.002294

Fraction of annotations for the query sequences containing the term

Term	Score
nanger granti	1.000000
kenya	1.000000
feces	1.000000
tropical grassland biome	1.000000
gazelle	1.000000
age	0.333333
female	0.166667
LOWER IN male	0.166667
male	0.166667
LOWER IN female	0.166667
old age	0.166667
LOWER IN young age	0.166667
LOWER IN old age	0.166667
young age	0.166667

Number of experiments associating the term to the sequence

Term	Score
nanger granti	1.000000
kenya	1.000000
feces	1.000000
tropical grassland biome	1.000000
gazelle	1.000000
female	1.000000
LOWER IN male	1.000000
male	1.000000
LOWER IN female	1.000000
age	1.000000
old age	1.000000
LOWER IN young age	1.000000
LOWER IN old age	1.000000
young age	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
78	amnon	dominant nanger granti, kenya, feces, tropical grassland biome, gazelle	2017-03-01	v4	1 / 10	approved	No
78	amnon	common nanger granti, kenya, feces, tropical grassland biome, gazelle	2017-03-01	v4	1 / 234	approved	No
78	amnon	higher in younger gazelles ( high in age young age compared to old age in nanger granti kenya feces tropical grassland biome gazelle )	2017-03-01	v4	1 / 268	approved	No
78	amnon	higher in older gazelles ( high in age old age compared to young age in nanger granti kenya feces tropical grassland biome gazelle )	2017-03-01	v4	1 / 273	approved	No
78	amnon	high in male compared to female in nanger granti kenya feces tropical grassland biome gazelle	2017-03-01	v4	1 / 301	approved	No
78	amnon	high in female compared to male in nanger granti kenya feces tropical grassland biome gazelle	2017-03-01	v4	1 / 811	approved	No

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