Experiment ID: 738

Field Description
nameimpact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce campylobacter
sraprjeb34742
doihttps://doi.org/10.1186/s40168-020-00908-8
datamd52006feb4db8bd8f1dedbe4b05794ec73
mapmd5bd618c1d90324b9c355909893537ff5b

Annotations for experiment:

term enrichment score
TermScore
age 30 days0.285714
LOWER IN high wellfare feed0.250000
high wellfare feed0.250000
standard feed0.200000
LOWER IN standard feed0.200000
age 1 week0.153846
LOWER IN age 30 days0.153846
LOWER IN age 1 week0.105263
united kingdom0.062500
chicken0.047619
gallus gallus0.045455
caecum0.020000
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN age 30 days0.333333
LOWER IN high wellfare feed0.333333
high wellfare feed0.333333
age 30 days0.200000
standard feed0.200000
LOWER IN standard feed0.200000
LOWER IN age 1 week0.111111
age 1 week0.090909
united kingdom0.032258
chicken0.024390
gallus gallus0.023256
caecum0.010101
Fraction of annotations for the query sequences containing the term
TermScore
gallus gallus1.000000
chicken1.000000
united kingdom1.000000
caecum1.000000
age 30 days0.500000
age 1 week0.500000
standard feed0.200000
LOWER IN high wellfare feed0.200000
high wellfare feed0.200000
LOWER IN standard feed0.200000
LOWER IN age 1 week0.100000
LOWER IN age 30 days0.100000
Number of experiments associating the term to the sequence
TermScore
gallus gallus1.000000
chicken1.000000
united kingdom1.000000
age 30 days1.000000
LOWER IN age 1 week1.000000
caecum1.000000
age 1 week1.000000
LOWER IN age 30 days1.000000
standard feed1.000000
LOWER IN high wellfare feed1.000000
high wellfare feed1.000000
LOWER IN standard feed1.000000

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