dbBact

Field	Description
name	microbiome variability across the native and invasive range of the ascidian clavelina oblonga
sra	srp199333
sra	prjna544485
doi	doi:10.1128/aem.02233-20
datamd5	5653521aca333da314291b5f721d7989
mapmd5	4edffff30aade11924df4011b5d25952

term enrichment score

Term	Score
clavelina oblonga	0.444444
harbor	0.444444
inner tunic	0.444444
state of south carolina	0.333333
sea squirts	0.307692
florida	0.250000
LOWER IN italy	0.222222
LOWER IN mediterranean sea	0.222222
LOWER IN brazil	0.222222
LOWER IN kingdom of spain	0.181818
LOWER IN atlantic ocean	0.181818
mediterranean sea	0.117647
state of north carolina	0.100000
atlantic ocean	0.080000
saline water	0.071429
LOWER IN united states of america	0.068966
brazil	0.036364
kingdom of spain	0.035088
italy	0.028986
sea water	0.022727
united states of america	0.003328

Fraction of dbbact annotations with this term covered by the query

Term	Score
clavelina oblonga	0.333333
harbor	0.333333
inner tunic	0.333333
LOWER IN italy	0.333333
LOWER IN mediterranean sea	0.333333
state of south carolina	0.333333
LOWER IN brazil	0.333333
sea squirts	0.200000
LOWER IN kingdom of spain	0.200000
florida	0.200000
LOWER IN atlantic ocean	0.200000
mediterranean sea	0.090909
state of north carolina	0.058824
atlantic ocean	0.043478
LOWER IN united states of america	0.043478
saline water	0.040000
brazil	0.020408
kingdom of spain	0.019608
italy	0.015873
sea water	0.011765
united states of america	0.001669

Fraction of annotations for the query sequences containing the term

Term	Score
clavelina oblonga	0.666667
sea squirts	0.666667
harbor	0.666667
inner tunic	0.666667
united states of america	0.500000
atlantic ocean	0.500000
sea water	0.333333
saline water	0.333333
florida	0.333333
state of south carolina	0.333333
state of north carolina	0.333333
brazil	0.166667
LOWER IN kingdom of spain	0.166667
LOWER IN italy	0.166667
LOWER IN mediterranean sea	0.166667
LOWER IN atlantic ocean	0.166667
LOWER IN united states of america	0.166667
LOWER IN brazil	0.166667
kingdom of spain	0.166667
italy	0.166667
mediterranean sea	0.166667

Number of experiments associating the term to the sequence

Term	Score
clavelina oblonga	1.000000
sea squirts	1.000000
harbor	1.000000
inner tunic	1.000000
brazil	1.000000
united states of america	1.000000
atlantic ocean	1.000000
LOWER IN kingdom of spain	1.000000
LOWER IN italy	1.000000
LOWER IN mediterranean sea	1.000000
sea water	1.000000
saline water	1.000000
florida	1.000000
state of south carolina	1.000000
state of north carolina	1.000000
LOWER IN atlantic ocean	1.000000
LOWER IN united states of america	1.000000
LOWER IN brazil	1.000000
kingdom of spain	1.000000
italy	1.000000
mediterranean sea	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
699	amnon	dominant sea water, saline water, atlantic ocean, florida, state of south carolina, state of north carolina, united states of america	2028-04-01	v4	1 / 12	approved	No
699	amnon	dominant clavelina oblonga, sea squirts, harbor, inner tunic	2028-04-01	v4	1 / 13	approved	No
699	amnon	common clavelina oblonga, sea squirts, harbor, inner tunic	2028-04-01	v4	1 / 123	approved	No
699	amnon	high in kingdom of spain italy mediterranean sea compared to atlantic ocean united states of america brazil in inner tunic harbor sea squirts clavelina oblonga	2028-04-01	v4	1 / 216	approved	No
699	amnon	common sea water, saline water, atlantic ocean, florida, state of south carolina, state of north carolina, united states of america	2028-04-01	v4	1 / 254	approved	No
699	amnon	high in brazil united states of america atlantic ocean compared to kingdom of spain italy mediterranean sea in clavelina oblonga sea squirts harbor inner tunic	2028-04-01	v4	1 / 317	approved	No

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