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Experiment ID: 688

Field	Description
name	evaluating the profound effect of gut microbiome on host appetite in pigs
sra	prjna356465
doi	https://doi.org/10.1186/s12866-018-1364-8
datamd5	efb2335addec78459c9ceb057e0dbd6c
mapmd5	eb91d87423c99fa08593c21359294ff1

Annotations for experiment:

term enrichment score

Term	Score
duroc pig	0.500000
age 140 days	0.333333
nanchang city prefecture	0.333333
LOWER IN male organism	0.133333
LOWER IN female organism	0.095238
sus scrofa	0.058824
pig	0.058824
male organism	0.054054
female organism	0.048780
LOWER IN male	0.036364
LOWER IN female	0.032787
male	0.019417
female	0.012270
research facility	0.005236
china	0.004717
feces	0.002294

Fraction of dbbact annotations with this term covered by the query

Term	Score
duroc pig	0.333333
age 140 days	0.200000
nanchang city prefecture	0.200000
LOWER IN male organism	0.090909
LOWER IN female organism	0.058824
sus scrofa	0.030303
pig	0.030303
male organism	0.030303
female organism	0.027027
LOWER IN male	0.019608
LOWER IN female	0.017544
male	0.010101
female	0.006289
research facility	0.002625
china	0.002364
feces	0.001148

Fraction of annotations for the query sequences containing the term

Term	Score
sus scrofa	1.000000
pig	1.000000
china	1.000000
duroc pig	1.000000
research facility	1.000000
age 140 days	1.000000
feces	1.000000
nanchang city prefecture	1.000000
female organism	0.250000
female	0.250000
LOWER IN male	0.250000
LOWER IN male organism	0.250000
male	0.250000
male organism	0.250000
LOWER IN female organism	0.250000
LOWER IN female	0.250000

Number of experiments associating the term to the sequence

Term	Score
sus scrofa	1.000000
pig	1.000000
china	1.000000
duroc pig	1.000000
research facility	1.000000
age 140 days	1.000000
feces	1.000000
nanchang city prefecture	1.000000
female organism	1.000000
female	1.000000
LOWER IN male	1.000000
LOWER IN male organism	1.000000
male	1.000000
male organism	1.000000
LOWER IN female organism	1.000000
LOWER IN female	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
688	amnon	dominant sus scrofa, pig, china, duroc pig, research facility, age 140 days, feces, nanchang city prefecture	2028-03-09	v4	1 / 17	approved	No
688	amnon	high in male male organism compared to female organism female in sus scrofa pig china duroc pig research facility age 140 days feces nanchang city prefecture	2028-03-09	v4	1 / 39	approved	No
688	amnon	high in female organism female compared to male male organism in sus scrofa pig china duroc pig research facility age 140 days feces nanchang city prefecture	2028-03-09	v4	1 / 239	approved	No
688	amnon	common sus scrofa, pig, china, duroc pig, research facility, age 140 days, feces, nanchang city prefecture	2028-03-09	v4	1 / 278	approved	No

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