Experiment ID: 683

Field Description
nameantibiotics-driven gut microbiome perturbation alters immunity to vaccines in humans
sraprjna505336
doihttps://doi.org/10.1016/j.cell.2019.08.010
datamd51023c166accf1dd7f41fad925fd5a533
mapmd53829d2d53e477c35ae9ee5684321b6db

Annotations for experiment:

term enrichment score
TermScore
neomycin0.222222
vancomycin0.222222
LOWER IN neomycin0.181818
metronidazole0.153846
LOWER IN vancomycin0.133333
LOWER IN metronidazole0.105263
LOWER IN antibiotic0.048780
antibiotic0.048780
state of california0.030303
LOWER IN control0.004494
control0.004396
adult0.004082
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN neomycin0.200000
neomycin0.142857
vancomycin0.142857
LOWER IN vancomycin0.111111
metronidazole0.090909
LOWER IN metronidazole0.076923
LOWER IN antibiotic0.028571
antibiotic0.025641
state of california0.015385
LOWER IN control0.002278
control0.002227
adult0.002045
united states of america0.001669
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
adult1.000000
united states of america1.000000
state of california1.000000
antibiotic0.500000
neomycin0.500000
vancomycin0.500000
metronidazole0.500000
control0.166667
LOWER IN antibiotic0.166667
LOWER IN vancomycin0.166667
LOWER IN neomycin0.166667
LOWER IN metronidazole0.166667
LOWER IN control0.166667
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
feces1.000000
adult1.000000
united states of america1.000000
state of california1.000000
control1.000000
LOWER IN antibiotic1.000000
LOWER IN vancomycin1.000000
LOWER IN neomycin1.000000
LOWER IN metronidazole1.000000
antibiotic1.000000
neomycin1.000000
vancomycin1.000000
metronidazole1.000000
LOWER IN control1.000000

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