dbBact

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Experiment ID: 652

Field	Description
name	oral microbiota perturbations are linked to high risk for rheumatoid arthritis
sra	prjna578951
doi	https://doi.org/10.3389/fcimb.2019.00475
datamd5	a6194aec4ee317beb2102e9bede8d692
mapmd5	3d9d2ab0c0964d8ba67c81ef50da182a

Annotations for experiment:

term enrichment score

Term	Score
rheumatoid arthritis	0.222222
LOWER IN rheumatoid arthritis	0.222222
sichuan province	0.111111
saliva	0.014925
china	0.004717
LOWER IN control	0.004515
control	0.004415
adult	0.004082
homo sapiens	0.002591

Fraction of dbbact annotations with this term covered by the query

Term	Score
rheumatoid arthritis	0.200000
LOWER IN rheumatoid arthritis	0.200000
sichuan province	0.058824
saliva	0.007519
china	0.002364
LOWER IN control	0.002278
control	0.002227
adult	0.002045
homo sapiens	0.001297

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
saliva	1.000000
adult	1.000000
china	1.000000
sichuan province	1.000000
rheumatoid arthritis	0.250000
LOWER IN control	0.250000
control	0.250000
LOWER IN rheumatoid arthritis	0.250000

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
saliva	1.000000
adult	1.000000
china	1.000000
sichuan province	1.000000
rheumatoid arthritis	1.000000
LOWER IN control	1.000000
control	1.000000
LOWER IN rheumatoid arthritis	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
652	amnon	dominant homo sapiens, saliva, adult, china, sichuan province	2020-09-13	v3	1 / 16	approved	No
652	amnon	high in control compared to rheumatoid arthritis in homo sapiens saliva adult china sichuan province	2020-09-13	v3	1 / 31	approved	No
652	amnon	high in rheumatoid arthritis compared to control in homo sapiens saliva adult china sichuan province	2020-09-13	v3	1 / 44	approved	No
652	amnon	common homo sapiens, saliva, adult, china, sichuan province	2020-09-13	v3	1 / 166	approved	No

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