Experiment ID: 650

Field Description
nameus nativity and dietary acculturation impact the gut microbiome in a diverse us population
sraprjna559143
doihttps://doi.org/10.1038/s41396-020-0630-6
datamd5acc8b806d92b4e952aad7b4a69c36ec1
mapmd5e99d4ac6dded7023194ad11417e5e45c

Annotations for experiment:

term enrichment score
TermScore
asian0.320000
european0.214286
caucasian0.193548
african american0.173913
bacteroides plebeius0.133333
seaweed degrading0.133333
state of new york0.132597
LOWER IN asian0.125000
LOWER IN european0.117647
LOWER IN caucasian0.111111
LOWER IN body mass index0.111111
body mass index0.100000
low bmi0.090909
LOWER IN low bmi0.090909
LOWER IN high bmi0.086957
high bmi0.074074
LOWER IN male0.051282
LOWER IN female0.047619
male0.031746
female0.021505
adult0.008127
united states of america0.006643
homo sapiens0.005167
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
bacteroides plebeius0.500000
seaweed degrading0.500000
LOWER IN asian0.333333
asian0.333333
LOWER IN european0.250000
european0.200000
LOWER IN caucasian0.200000
LOWER IN body mass index0.200000
african american0.200000
caucasian0.166667
body mass index0.142857
low bmi0.111111
LOWER IN low bmi0.111111
LOWER IN high bmi0.100000
state of new york0.071429
high bmi0.071429
LOWER IN male0.038462
LOWER IN female0.034483
male0.020000
female0.012500
adult0.004082
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
state of new york0.923077
united states of america0.923077
homo sapiens0.923077
adult0.923077
asian0.307692
caucasian0.230769
european0.230769
african american0.153846
LOWER IN asian0.076923
LOWER IN european0.076923
LOWER IN caucasian0.076923
male0.076923
LOWER IN female0.076923
low bmi0.076923
LOWER IN high bmi0.076923
LOWER IN body mass index0.076923
female0.076923
LOWER IN male0.076923
LOWER IN low bmi0.076923
body mass index0.076923
high bmi0.076923
bacteroides plebeius0.076923
seaweed degrading0.076923
Number of experiments associating the term to the sequence
TermScore
state of new york1.000000
united states of america1.000000
homo sapiens1.000000
adult1.000000
feces1.000000
caucasian1.000000
european1.000000
LOWER IN asian1.000000
asian1.000000
LOWER IN european1.000000
LOWER IN caucasian1.000000
male1.000000
LOWER IN female1.000000
low bmi1.000000
LOWER IN high bmi1.000000
LOWER IN body mass index1.000000
female1.000000
LOWER IN male1.000000
african american1.000000
LOWER IN low bmi1.000000
body mass index1.000000
high bmi1.000000
bacteroides plebeius1.000000
seaweed degrading1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
650amnonother bacteroides plebeius, seaweed degrading, feces, asian2020-09-12v41 / 1approvedNo
650amnondominant feces, adult, homo sapiens, united states of america, state of new york, asian2020-09-09v41 / 18approvedNo
650amnondominant feces, adult, homo sapiens, united states of america, caucasian, european, state of new york2020-09-09v41 / 20approvedNo
650amnondominant feces, adult, homo sapiens, united states of america, state of new york, african american2020-09-09v41 / 22approvedNo
650amnonpositively correlated with BMI ( high in body mass index high bmi compared to low bmi in state of new york united states of america homo sapiens adult feces )2020-09-09v41 / 26approvedNo
650amnoncommon feces, adult, homo sapiens, united states of america, state of new york, african american2020-09-09v41 / 52approvedNo
650amnoncommon feces, adult, homo sapiens, united states of america, caucasian, european, state of new york2020-09-09v41 / 56approvedNo
650amnon high in female compared to male in state of new york united states of america homo sapiens adult feces 2020-09-10v41 / 57approvedNo
650amnoncommon feces, adult, homo sapiens, united states of america, state of new york, asian2020-09-09v41 / 66approvedNo
650amnonnegatively correlated with BMI ( high in low bmi compared to high bmi body mass index in feces adult homo sapiens united states of america state of new york )2020-09-09v41 / 75approvedNo
650amnon high in male compared to female in state of new york united states of america homo sapiens adult feces 2020-09-10v41 / 82approvedNo
650amnon high in asian compared to european caucasian in state of new york united states of america homo sapiens adult feces 2020-09-12v41 / 317approvedNo
650amnon high in caucasian european compared to asian in state of new york united states of america homo sapiens adult feces 2020-09-12v41 / 475approvedNo

Problems / suggestions? Please visit the dbBact forum