Experiment ID: 629

Field Description
namehiv-associated gut dysbiosis is independent of sexual practice and correlates with noncommunicable diseases
sraprjna589036
doihttps://doi.org/10.1038/s41467-020-16222-8
datamd55e4edcf34410f25395f8c37f2c52a5b6
mapmd5565236becda481cf3b7de5cf88de4263

Annotations for experiment:

term enrichment score
TermScore
amsterdam0.333333
LOWER IN acquired immunodeficiency syndrome0.266667
heterosexual0.230769
msw0.230769
homosexual0.186047
msm0.186047
kingdom of the netherlands0.181818
acquired immunodeficiency syndrome0.153846
LOWER IN hiv infection0.137931
LOWER IN heterosexual0.125000
LOWER IN msw0.125000
LOWER IN homosexual0.125000
LOWER IN msm0.125000
hiv infection0.090909
male0.036036
female0.023392
control0.008677
LOWER IN control0.008658
adult0.008130
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN acquired immunodeficiency syndrome0.500000
acquired immunodeficiency syndrome0.500000
LOWER IN heterosexual0.200000
LOWER IN msw0.200000
amsterdam0.200000
heterosexual0.200000
msw0.200000
LOWER IN homosexual0.200000
LOWER IN msm0.200000
homosexual0.125000
msm0.125000
LOWER IN hiv infection0.111111
kingdom of the netherlands0.100000
hiv infection0.090909
male0.020000
female0.012500
LOWER IN control0.004545
control0.004444
adult0.004082
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
adult1.000000
kingdom of the netherlands1.000000
amsterdam1.000000
homosexual0.363636
msm0.363636
heterosexual0.272727
msw0.272727
male0.181818
female0.181818
control0.181818
LOWER IN hiv infection0.181818
LOWER IN acquired immunodeficiency syndrome0.181818
LOWER IN heterosexual0.090909
LOWER IN msw0.090909
LOWER IN homosexual0.090909
LOWER IN msm0.090909
hiv infection0.090909
acquired immunodeficiency syndrome0.090909
LOWER IN control0.090909
Number of experiments associating the term to the sequence
TermScore
homosexual1.000000
msm1.000000
LOWER IN heterosexual1.000000
LOWER IN msw1.000000
feces1.000000
homo sapiens1.000000
adult1.000000
male1.000000
kingdom of the netherlands1.000000
amsterdam1.000000
heterosexual1.000000
msw1.000000
female1.000000
LOWER IN homosexual1.000000
LOWER IN msm1.000000
control1.000000
LOWER IN hiv infection1.000000
LOWER IN acquired immunodeficiency syndrome1.000000
hiv infection1.000000
acquired immunodeficiency syndrome1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
629amnon high in control compared to hiv infection acquired immunodeficiency syndrome in feces homo sapiens adult kingdom of the netherlands amsterdam homosexual msm 2020-05-31v41 / 9approvedNo
629amnon high in hiv infection acquired immunodeficiency syndrome compared to control in feces homo sapiens adult kingdom of the netherlands amsterdam 2020-05-31v41 / 10approvedNo
629amnondominant feces, homo sapiens, adult, kingdom of the netherlands, amsterdam, homosexual, msm2020-05-31v41 / 20approvedNo
629amnondominant feces, homo sapiens, adult, kingdom of the netherlands, amsterdam, heterosexual, msw2020-05-31v41 / 20approvedNo
629amnondominant feces, homo sapiens, female, adult, kingdom of the netherlands, amsterdam2020-05-31v41 / 22approvedNo
629amnon high in control compared to hiv infection acquired immunodeficiency syndrome in feces homo sapiens adult kingdom of the netherlands amsterdam 2020-05-31v41 / 34approvedNo
629amnon high in heterosexual msw compared to homosexual msm in feces homo sapiens adult male kingdom of the netherlands amsterdam 2020-05-31v41 / 85approvedNo
629amnoncommon feces, homo sapiens, female, adult, kingdom of the netherlands, amsterdam2020-05-31v41 / 89approvedNo
629amnoncommon feces, homo sapiens, adult, kingdom of the netherlands, amsterdam, heterosexual, msw2020-05-31v41 / 97approvedNo
629amnoncommon feces, homo sapiens, adult, kingdom of the netherlands, amsterdam, homosexual, msm2020-05-31v41 / 141approvedNo
629amnon high in homosexual msm compared to heterosexual msw in feces homo sapiens adult male kingdom of the netherlands amsterdam 2020-05-31v41 / 154approvedNo

Problems / suggestions? Please visit the dbBact forum