Experiment ID: 617

Field Description
nameshift in the cow milk microbiota during alpine pasture as analyzed by culture dependent and high-throughput sequencing techniques
sraprjna528228
doihttps://doi.org/10.1016/j.fm.2020.103504
datamd55c104e44bec3c02ddd7f3a759a18e21b
mapmd515f847d79f0670c20eb7e2f8ebf13485

Annotations for experiment:

term enrichment score
TermScore
lowland pasture0.555556
lowland farm0.555556
cow milk (fluid)0.500000
cow milk (raw)0.500000
alpine pasture0.428571
milk0.400000
alpine0.352941
LOWER IN alpine0.200000
LOWER IN alpine pasture0.200000
LOWER IN lowland pasture0.200000
LOWER IN lowland farm0.200000
october0.200000
LOWER IN june0.200000
june0.200000
LOWER IN october0.200000
italy0.060606
farm0.045455
Fraction of dbbact annotations with this term covered by the query
TermScore
lowland pasture0.500000
lowland farm0.500000
LOWER IN alpine0.500000
LOWER IN alpine pasture0.500000
alpine pasture0.500000
LOWER IN lowland pasture0.500000
LOWER IN lowland farm0.500000
october0.500000
LOWER IN june0.500000
june0.500000
LOWER IN october0.500000
cow milk (fluid)0.333333
cow milk (raw)0.333333
alpine0.333333
milk0.250000
italy0.031250
farm0.023256
Fraction of annotations for the query sequences containing the term
TermScore
farm1.000000
milk1.000000
italy1.000000
cow milk (fluid)1.000000
cow milk (raw)1.000000
lowland pasture0.625000
lowland farm0.625000
alpine0.375000
alpine pasture0.375000
LOWER IN alpine0.125000
LOWER IN alpine pasture0.125000
LOWER IN lowland pasture0.125000
LOWER IN lowland farm0.125000
autumn0.125000
october0.125000
LOWER IN june0.125000
LOWER IN spring (season)0.125000
june0.125000
spring (season)0.125000
LOWER IN autumn0.125000
LOWER IN october0.125000
Number of experiments associating the term to the sequence
TermScore
lowland pasture1.000000
lowland farm1.000000
LOWER IN alpine1.000000
LOWER IN alpine pasture1.000000
farm1.000000
milk1.000000
italy1.000000
cow milk (fluid)1.000000
cow milk (raw)1.000000
alpine1.000000
alpine pasture1.000000
LOWER IN lowland pasture1.000000
LOWER IN lowland farm1.000000
autumn1.000000
october1.000000
LOWER IN june1.000000
LOWER IN spring (season)1.000000
june1.000000
spring (season)1.000000
LOWER IN autumn1.000000
LOWER IN october1.000000

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