Experiment ID: 611

Field Description
nameeffects of sex and chronic cigarette smoke exposure on the mouse cecal microbiome
sraprjna589852
doihttps://doi.org/10.1371/journal.pone.0230932
datamd5c8f62de26a684241c5f9fcbeb6bfa687
mapmd5645cf6be5eb4163616ecf66609878c7b

Annotations for experiment:

term enrichment score
TermScore
age 9 months0.500000
ovariectomized female0.181818
LOWER IN ovariectomy0.181818
LOWER IN ovariectomized female0.181818
ovariectomy0.153846
cecal content0.142857
LOWER IN nicotine dependence0.133333
nicotine dependence0.117647
LOWER IN male0.033898
LOWER IN female0.030769
canada0.028571
caecum0.020000
male0.018692
mouse0.015152
mus musculus0.013699
female0.012371
research facility0.005236
LOWER IN control0.004515
control0.004415
Fraction of dbbact annotations with this term covered by the query
TermScore
age 9 months0.333333
ovariectomized female0.333333
LOWER IN ovariectomy0.333333
LOWER IN ovariectomized female0.333333
ovariectomy0.200000
LOWER IN nicotine dependence0.142857
nicotine dependence0.111111
cecal content0.076923
LOWER IN male0.019608
LOWER IN female0.017544
canada0.014493
caecum0.010101
male0.010101
mouse0.007634
mus musculus0.006897
female0.006289
research facility0.002625
LOWER IN control0.002278
control0.002227
Fraction of annotations for the query sequences containing the term
TermScore
mouse1.000000
mus musculus1.000000
canada1.000000
research facility1.000000
age 9 months1.000000
cecal content1.000000
caecum1.000000
female0.375000
control0.250000
LOWER IN control0.250000
LOWER IN nicotine dependence0.125000
nicotine dependence0.125000
LOWER IN male0.125000
ovariectomy0.125000
ovariectomized female0.125000
LOWER IN ovariectomy0.125000
LOWER IN ovariectomized female0.125000
male0.125000
LOWER IN female0.125000
Number of experiments associating the term to the sequence
TermScore
mouse1.000000
mus musculus1.000000
canada1.000000
research facility1.000000
age 9 months1.000000
cecal content1.000000
caecum1.000000
control1.000000
LOWER IN nicotine dependence1.000000
nicotine dependence1.000000
LOWER IN control1.000000
female1.000000
LOWER IN male1.000000
ovariectomy1.000000
ovariectomized female1.000000
LOWER IN ovariectomy1.000000
LOWER IN ovariectomized female1.000000
male1.000000
LOWER IN female1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
611amnon high in male compared to female in mouse mus musculus canada research facility age 9 months cecal content caecum 2020-04-21v41 / 13approvedNo
611amnondominant mouse, mus musculus, canada, research facility, age 9 months, cecal content, caecum2020-04-21v41 / 17approvedNo
611amnon high in ovariectomy ovariectomized female compared to control in mouse mus musculus canada research facility age 9 months cecal content female caecum 2020-04-21v41 / 22approvedNo
611amnon high in control compared to ovariectomy ovariectomized female in mouse mus musculus canada research facility age 9 months cecal content female caecum 2020-04-21v41 / 22approvedNo
611amnon high in female compared to male in mouse mus musculus canada research facility age 9 months cecal content caecum 2020-04-21v41 / 33approvedNo
611amnonhigher in feces of mice exposed to cigarette smoke for 6 months compared to controls ( high in nicotine dependence compared to control in mouse mus musculus canada research facility age 9 months cecal content caecum )2020-04-21v41 / 45approvedNo
611amnonlower in feces of mice exposed to cigarette smoke for 6 months compared to controls ( high in control compared to nicotine dependence in mouse mus musculus canada research facility age 9 months cecal content caecum )2020-04-21v41 / 66approvedNo
611amnoncommon mouse, mus musculus, canada, research facility, age 9 months, cecal content, caecum2020-04-21v41 / 145approvedNo

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