Experiment ID: 604

Field Description
name16s rrna gene sequencing reveals an altered composition of the gut microbiota in chickens infected with a nephropathogenic infectious bronchitis virus
sraprjna533742
doihttps://doi.org/10.1038/s41598-020-60564-8
datamd52fabb16bb8929bb9fc73c7bd27e19c9a
mapmd500849a03a71284a23878a4e7a9c22df4

Annotations for experiment:

term enrichment score
TermScore
LOWER IN bronchitis0.333333
LOWER IN infectious bronchitis virus0.333333
bronchitis0.333333
infectious bronchitis virus0.333333
cecal content0.250000
chicken0.090909
gallus gallus0.086957
caecum0.039216
research facility0.010417
china0.009390
LOWER IN control0.008929
control0.008734
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN bronchitis0.500000
LOWER IN infectious bronchitis virus0.500000
bronchitis0.500000
infectious bronchitis virus0.500000
cecal content0.142857
chicken0.047619
gallus gallus0.045455
caecum0.020000
research facility0.005236
china0.004717
LOWER IN control0.004545
control0.004444
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
caecum1.000000
gallus gallus1.000000
chicken1.000000
cecal content1.000000
china1.000000
control0.250000
LOWER IN bronchitis0.250000
LOWER IN infectious bronchitis virus0.250000
bronchitis0.250000
infectious bronchitis virus0.250000
LOWER IN control0.250000
Number of experiments associating the term to the sequence
TermScore
research facility1.000000
caecum1.000000
gallus gallus1.000000
chicken1.000000
cecal content1.000000
china1.000000
control1.000000
LOWER IN bronchitis1.000000
LOWER IN infectious bronchitis virus1.000000
bronchitis1.000000
infectious bronchitis virus1.000000
LOWER IN control1.000000

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