Experiment ID: 589

Field Description
namefiber-mediated nourishment of gut microbiota protects against diet-induced obesity by restoring il-22-mediated colonic health
sraprjeb23793
doihttps://doi.org/10.1016/j.chom.2017.11.003
datamd57ae581305fb91bb0925fcca0489390aa
mapmd588d7627fa8d91684d3c1da74ed64847e

Annotations for experiment:

term enrichment score
TermScore
high fat diet + inulin0.315789
low fat diet0.266667
LOWER IN low fat diet0.200000
LOWER IN high fat diet + inulin0.153846
jackson laboratories0.125000
state of georgia0.125000
mouse chow0.063492
high fat diet0.061856
LOWER IN high fat diet0.054054
LOWER IN mouse chow0.052632
c57bl/60.041667
mouse0.015152
mus musculus0.013699
research facility0.005236
united states of america0.003333
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
high fat diet + inulin0.333333
LOWER IN high fat diet + inulin0.333333
low fat diet0.200000
LOWER IN low fat diet0.200000
jackson laboratories0.066667
state of georgia0.066667
LOWER IN high fat diet0.037037
high fat diet0.034483
mouse chow0.034483
LOWER IN mouse chow0.030303
c57bl/60.021277
mouse0.007634
mus musculus0.006897
research facility0.002625
united states of america0.001669
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
mouse1.000000
mus musculus1.000000
c57bl/61.000000
research facility1.000000
feces1.000000
jackson laboratories1.000000
united states of america1.000000
state of georgia1.000000
mouse chow0.400000
low fat diet0.400000
high fat diet0.300000
high fat diet + inulin0.300000
LOWER IN mouse chow0.200000
LOWER IN low fat diet0.200000
LOWER IN high fat diet0.100000
LOWER IN high fat diet + inulin0.100000
Number of experiments associating the term to the sequence
TermScore
mouse1.000000
mus musculus1.000000
c57bl/61.000000
research facility1.000000
feces1.000000
jackson laboratories1.000000
united states of america1.000000
state of georgia1.000000
high fat diet1.000000
mouse chow1.000000
low fat diet1.000000
high fat diet + inulin1.000000
LOWER IN mouse chow1.000000
LOWER IN low fat diet1.000000
LOWER IN high fat diet1.000000
LOWER IN high fat diet + inulin1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
589amnondominant mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet + inulin2020-02-10v41 / 12approvedNo
589amnondominant mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, mouse chow, low fat diet, united states of america, state of georgia2020-02-10v41 / 16approvedNo
589amnondominant in high fat diet supplemented with cellulose in mice feces (dominant mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet)2020-02-10v41 / 17approvedNo
589amnon high in high fat diet + inulin compared to low fat diet mouse chow in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 19approvedNo
589amnon high in mouse chow low fat diet compared to high fat diet + inulin in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 51approvedNo
589amnon high in mouse chow low fat diet compared to high fat diet in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 74approvedNo
589amnon high in high fat diet compared to mouse chow low fat diet in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 75approvedNo
589amnoncommon mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet + inulin2020-02-10v41 / 78approvedNo
589amnoncommon mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, mouse chow, low fat diet, united states of america, state of georgia2020-02-10v41 / 151approvedNo
589amnoncommon in high fat diet supplemented with cellulose in mice feces (common mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet)2020-02-10v41 / 172approvedNo

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