Experiment ID: 582

Field Description
nameear mite infection is associated with altered microbial communities in genetically depauperate santa catalina island foxes (urocyon littoralis catalinae)
sraprjna580023
doidoi: 10.1111/mec.15325
datamd547051770d3cc90960311ccf37ce6cdaa
mapmd598717c06ce01167fcb79a782b1d25647

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
perianal skin0.500000
LOWER IN external acoustic meatus0.500000
LOWER IN ear canal0.500000
urocyon littoralis0.500000
urocyon littoralis catalinae0.500000
santa catalina island fox0.500000
LOWER IN perianal skin0.500000
labial commissure0.500000
external ear0.500000
LOWER IN lip0.500000
LOWER IN labial commissure0.500000
santa catalina island0.333333
lip0.333333
external naris0.333333
ear canal0.250000
external acoustic meatus0.200000
axilla0.166667
LOWER IN rectum0.142857
rectum0.083333
pair of nares0.071429
wild0.027027
united states of america0.003333
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
santa catalina island1.000000
urocyon littoralis1.000000
urocyon littoralis catalinae1.000000
santa catalina island fox1.000000
wild1.000000
external acoustic meatus0.250000
ear canal0.250000
rectum0.187500
perianal skin0.187500
lip0.187500
labial commissure0.187500
LOWER IN external acoustic meatus0.125000
LOWER IN ear canal0.125000
axilla0.125000
external ear0.125000
pair of nares0.125000
external naris0.125000
LOWER IN rectum0.062500
LOWER IN perianal skin0.062500
LOWER IN lip0.062500
LOWER IN labial commissure0.062500
Number of experiments associating the term to the sequence
TermScore
rectum1.000000
perianal skin1.000000
LOWER IN external acoustic meatus1.000000
LOWER IN ear canal1.000000
united states of america1.000000
santa catalina island1.000000
urocyon littoralis1.000000
urocyon littoralis catalinae1.000000
santa catalina island fox1.000000
wild1.000000
external acoustic meatus1.000000
ear canal1.000000
LOWER IN rectum1.000000
LOWER IN perianal skin1.000000
lip1.000000
labial commissure1.000000
axilla1.000000
external ear1.000000
LOWER IN lip1.000000
LOWER IN labial commissure1.000000
pair of nares1.000000
external naris1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
582amnondominant united states of america, external acoustic meatus, ear canal, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 6approvedNo
582amnondominant united states of america, external ear, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 12approvedNo
582amnondominant united states of america, axilla, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 16approvedNo
582amnondominant united states of america, lip, labial commissure, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 18approvedNo
582amnondominant united states of america, pair of nares, external naris, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 19approvedNo
582amnondominant united states of america, rectum, perianal skin, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 19approvedNo
582amnoncommon united states of america, external acoustic meatus, ear canal, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 30approvedNo
582amnoncommon united states of america, lip, labial commissure, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 68approvedNo
582amnoncommon united states of america, rectum, perianal skin, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 88approvedNo
582amnoncommon united states of america, pair of nares, external naris, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 92approvedNo
582amnon high in external acoustic meatus ear canal compared to lip labial commissure in united states of america santa catalina island urocyon littoralis urocyon littoralis catalinae santa catalina island fox wild 2020-01-22v41 / 105approvedNo
582amnoncommon united states of america, external ear, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 124approvedNo
582amnoncommon united states of america, axilla, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox, wild2020-01-22v41 / 140approvedNo
582amnon high in lip labial commissure compared to external acoustic meatus ear canal in united states of america santa catalina island urocyon littoralis urocyon littoralis catalinae santa catalina island fox wild 2020-01-22v41 / 142approvedNo
582amnon high in external acoustic meatus ear canal compared to rectum perianal skin in united states of america santa catalina island urocyon littoralis urocyon littoralis catalinae santa catalina island fox wild 2020-01-22v41 / 374approvedNo
582amnon high in rectum perianal skin compared to external acoustic meatus ear canal in united states of america santa catalina island urocyon littoralis urocyon littoralis catalinae santa catalina island fox wild 2020-01-22v41 / 400approvedNo

Problems / suggestions? Please visit the dbBact forum