Experiment ID: 578

Field Description
namegut microbiota linked to sexual preference and hiv infection
sraprjna307231
doihttp://dx.doi.org/10.1016/j.ebiom.2016.01.032
datamd5deffe85ec5dd0ab12e14c7ae296bb90c
mapmd53ccef36d5fb4b76ef3b12898f4406222

Annotations for experiment:

term enrichment score
TermScore
gay0.233766
msw0.169492
heterosexual0.169492
homosexual0.120805
msm0.120805
LOWER IN sweden0.105263
LOWER IN kingdom of spain0.105263
LOWER IN gay0.095238
hiv infection0.088670
LOWER IN msw0.086957
LOWER IN heterosexual0.086957
LOWER IN homosexual0.086957
LOWER IN msm0.086957
LOWER IN hiv infection0.064516
sweden0.062350
kingdom of spain0.038405
male0.020000
control0.004427
LOWER IN control0.004415
adult0.004082
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN sweden0.200000
LOWER IN kingdom of spain0.200000
gay0.142857
LOWER IN gay0.142857
LOWER IN msw0.111111
LOWER IN heterosexual0.111111
msw0.111111
heterosexual0.111111
LOWER IN homosexual0.111111
LOWER IN msm0.111111
homosexual0.066667
msm0.066667
LOWER IN hiv infection0.058824
hiv infection0.047619
sweden0.032258
kingdom of spain0.019608
male0.010101
LOWER IN control0.002278
control0.002227
adult0.002045
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
adult1.000000
male1.000000
kingdom of spain0.928571
sweden0.928571
hiv infection0.642857
homosexual0.642857
msm0.642857
gay0.642857
msw0.357143
heterosexual0.357143
control0.357143
LOWER IN msw0.071429
LOWER IN heterosexual0.071429
LOWER IN homosexual0.071429
LOWER IN gay0.071429
LOWER IN msm0.071429
LOWER IN sweden0.071429
LOWER IN kingdom of spain0.071429
LOWER IN hiv infection0.071429
LOWER IN control0.071429
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
feces1.000000
hiv infection1.000000
kingdom of spain1.000000
sweden1.000000
adult1.000000
male1.000000
homosexual1.000000
msm1.000000
gay1.000000
LOWER IN msw1.000000
LOWER IN heterosexual1.000000
msw1.000000
heterosexual1.000000
LOWER IN homosexual1.000000
LOWER IN gay1.000000
LOWER IN msm1.000000
LOWER IN sweden1.000000
control1.000000
LOWER IN kingdom of spain1.000000
LOWER IN hiv infection1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
578amnon high in hiv infection compared to control in homo sapiens feces adult male msm gay homosexual kingdom of spain sweden 2020-01-14v31 / 1approvedNo
578amnondominant homo sapiens, feces, adult, male, msm, gay, homosexual, kingdom of spain, sweden, hiv infection2020-01-14v31 / 12approvedNo
578amnondominant homo sapiens, feces, adult, male, msm, gay, homosexual, kingdom of spain, sweden, control2020-01-14v31 / 13approvedNo
578amnondominant homo sapiens, feces, adult, male, kingdom of spain, sweden, msw, heterosexual, hiv infection2020-01-14v31 / 20approvedNo
578amnondominant homo sapiens, feces, adult, male, kingdom of spain, sweden, control, msw, heterosexual2020-01-14v31 / 26approvedNo
578amnon high in control compared to hiv infection in homo sapiens feces adult male msm gay homosexual kingdom of spain sweden 2020-01-14v31 / 32approvedNo
578amnoncommon homo sapiens, feces, adult, male, kingdom of spain, sweden, msw, heterosexual, hiv infection2020-01-14v31 / 53approvedNo
578amnon high in sweden compared to kingdom of spain in homo sapiens feces hiv infection adult male msm gay homosexual 2020-01-14v31 / 55approvedNo
578amnoncommon homo sapiens, feces, adult, male, msm, gay, homosexual, kingdom of spain, sweden, hiv infection2020-01-14v31 / 74approvedNo
578amnoncommon homo sapiens, feces, adult, male, kingdom of spain, sweden, control, msw, heterosexual2020-01-14v31 / 92approvedNo
578amnoncommon homo sapiens, feces, adult, male, msm, gay, homosexual, kingdom of spain, sweden, control2020-01-14v31 / 132approvedNo
578amnon high in kingdom of spain compared to sweden in homo sapiens feces hiv infection adult male msm gay homosexual 2020-01-14v31 / 133approvedNo
578amnonlower in gay (msm) individuals compared to heterosexual (msw) ( high in msw heterosexual compared to homosexual gay msm in homo sapiens feces hiv infection kingdom of spain sweden adult male )2020-01-14v31 / 220approvedNo
578amnonhigher in gay (msm) individuals compared to heterosexual (msw) ( high in homosexual msm gay compared to msw heterosexual in homo sapiens feces hiv infection kingdom of spain sweden adult male )2020-01-14v31 / 519approvedNo

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