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Experiment ID: 561

Field	Description
name	yak rumen microbial diversity at different forage growth stages of an alpine meadow on the qinghai-tibet plateau
sra	prjna504932
doi	https://doi.org/10.7717/peerj.7645
datamd5	7839f00b52219e69ca06512e42270e9d
mapmd5	2e8523d91ca2c41d95c6a62738f2cec1

Annotations for experiment:

term enrichment score

Term	Score
alpine meadow	0.666667
yak	0.333333
green stage diet	0.333333
LOWER IN grass growth diet	0.333333
withered grass diet	0.333333
grass growth diet	0.333333
LOWER IN withered grass diet	0.333333
LOWER IN green stage diet	0.333333
tibetan plateau	0.285714
bos grunniens	0.285714
ruminal fluid	0.200000
rumen	0.074074
china	0.009615

Fraction of dbbact annotations with this term covered by the query

Term	Score
alpine meadow	0.500000
green stage diet	0.500000
LOWER IN grass growth diet	0.500000
withered grass diet	0.500000
grass growth diet	0.500000
LOWER IN withered grass diet	0.500000
LOWER IN green stage diet	0.500000
yak	0.200000
tibetan plateau	0.166667
bos grunniens	0.166667
ruminal fluid	0.111111
rumen	0.038462
china	0.004831

Fraction of annotations for the query sequences containing the term

Term	Score
rumen	1.000000
tibetan plateau	1.000000
bos grunniens	1.000000
yak	1.000000
ruminal fluid	1.000000
china	1.000000
alpine meadow	1.000000
green stage diet	0.250000
spring (season)	0.250000
LOWER IN summer	0.250000
LOWER IN grass growth diet	0.250000
winter	0.250000
withered grass diet	0.250000
summer	0.250000
grass growth diet	0.250000
LOWER IN winter	0.250000
LOWER IN withered grass diet	0.250000
LOWER IN green stage diet	0.250000
LOWER IN spring (season)	0.250000

Number of experiments associating the term to the sequence

Term	Score
rumen	1.000000
tibetan plateau	1.000000
bos grunniens	1.000000
yak	1.000000
ruminal fluid	1.000000
china	1.000000
alpine meadow	1.000000
green stage diet	1.000000
spring (season)	1.000000
LOWER IN summer	1.000000
LOWER IN grass growth diet	1.000000
winter	1.000000
withered grass diet	1.000000
summer	1.000000
grass growth diet	1.000000
LOWER IN winter	1.000000
LOWER IN withered grass diet	1.000000
LOWER IN green stage diet	1.000000
LOWER IN spring (season)	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
561	amnon	dominant rumen, tibetan plateau, bos grunniens, yak, ruminal fluid, china, alpine meadow	2019-11-05	v3	1 / 3	approved	No
561	amnon	high in winter withered grass diet compared to green stage diet spring (season) in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow	2019-11-05	v3	1 / 18	approved	No
561	amnon	high in green stage diet spring (season) compared to winter withered grass diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow	2019-11-05	v3	1 / 35	approved	No
561	amnon	high in summer grass growth diet compared to green stage diet spring (season) in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow	2019-11-05	v3	1 / 256	approved	No
561	amnon	high in summer grass growth diet compared to winter withered grass diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow	2019-11-05	v3	1 / 294	approved	No
561	amnon	high in winter withered grass diet compared to summer grass growth diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow	2019-11-05	v3	1 / 357	approved	No
561	amnon	high in green stage diet spring (season) compared to summer grass growth diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow	2019-11-05	v3	1 / 397	approved	No
561	amnon	common rumen, tibetan plateau, bos grunniens, yak, ruminal fluid, china, alpine meadow	2019-11-05	v3	1 / 670	approved	No

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