Experiment ID: 542

Field Description
namemicrobiome profiles of ligature-induced periodontitis in nonhuman primates across the lifespan
sraprjna516659
doidoi:10.1128/iai.00067-19
datamd506eb0275f1fcff0a0aeb44c1410bf30f
mapmd5a965eab1012d728a618c48a9f2a002f3

Annotations for experiment:

term enrichment score
TermScore
age 12-23 years0.400000
age 1-7 years0.285714
LOWER IN induced periodontitis0.250000
induced periodontitis0.250000
puerto rico0.200000
LOWER IN age 12-23 years0.153846
LOWER IN age 1-7 years0.133333
macaca mulatta0.125000
LOWER IN periodontitis0.071429
monkey0.055556
periodontitis0.055556
subgingival plaque0.052632
LOWER IN child0.051282
dentition0.038462
LOWER IN adult0.033898
child0.016000
research facility0.005236
LOWER IN control0.004505
control0.004405
adult0.004073
Fraction of dbbact annotations with this term covered by the query
TermScore
age 12-23 years0.333333
LOWER IN induced periodontitis0.333333
LOWER IN age 12-23 years0.333333
induced periodontitis0.333333
LOWER IN age 1-7 years0.200000
age 1-7 years0.200000
puerto rico0.111111
macaca mulatta0.066667
LOWER IN periodontitis0.043478
LOWER IN child0.034483
periodontitis0.032258
monkey0.028571
subgingival plaque0.027027
LOWER IN adult0.020408
dentition0.019608
child0.008130
research facility0.002625
LOWER IN control0.002278
control0.002227
adult0.002045
Fraction of annotations for the query sequences containing the term
TermScore
subgingival plaque1.000000
dentition1.000000
monkey1.000000
macaca mulatta1.000000
research facility1.000000
puerto rico1.000000
adult0.500000
age 12-23 years0.500000
child0.500000
age 1-7 years0.500000
control0.200000
LOWER IN induced periodontitis0.200000
LOWER IN periodontitis0.200000
induced periodontitis0.200000
LOWER IN control0.200000
periodontitis0.200000
LOWER IN child0.100000
LOWER IN age 1-7 years0.100000
LOWER IN adult0.100000
LOWER IN age 12-23 years0.100000
Number of experiments associating the term to the sequence
TermScore
subgingival plaque1.000000
dentition1.000000
monkey1.000000
macaca mulatta1.000000
research facility1.000000
puerto rico1.000000
adult1.000000
age 12-23 years1.000000
LOWER IN child1.000000
LOWER IN age 1-7 years1.000000
child1.000000
age 1-7 years1.000000
control1.000000
LOWER IN induced periodontitis1.000000
LOWER IN periodontitis1.000000
LOWER IN adult1.000000
LOWER IN age 12-23 years1.000000
induced periodontitis1.000000
LOWER IN control1.000000
periodontitis1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v41 / 11approvedNo
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v41 / 15approvedNo
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v41 / 17approvedNo
542amnondominant subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, age 12-23 years, adult2019-08-01v41 / 19approvedNo
542amnondominant subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, child, age 1-7 years2019-08-01v41 / 19approvedNo
542amnon high in child age 1-7 years compared to adult age 12-23 years in subgingival plaque dentition monkey macaca mulatta research facility puerto rico 2019-08-01v41 / 23approvedNo
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v41 / 33approvedNo
542amnoncommon subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, child, age 1-7 years2019-08-01v41 / 41approvedNo
542amnoncommon subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, age 12-23 years, adult2019-08-01v41 / 208approvedNo
542amnon high in adult age 12-23 years compared to child age 1-7 years in subgingival plaque dentition monkey macaca mulatta research facility puerto rico 2019-08-01v41 / 337approvedNo

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