dbBact

This is the development server

Experiment ID: 532

Field	Description
name	microbiome and metabolome profiles associated with different types of short bowel syndrome: implications for treatment
sra	prjna434046
doi	doi: 10.1002/jpen.1595
datamd5	ee0e00862a7e28dacd39306f26310ce8
mapmd5	0b8c836a4a1b8164d613c92d158f46d8

Annotations for experiment:

term enrichment score

Term	Score
short bowel syndrome	0.500000
LOWER IN short bowel syndrome	0.250000
czech republic	0.181818
LOWER IN control	0.008850
control	0.008811
adult	0.008130
homo sapiens	0.005168
feces	0.004577

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN short bowel syndrome	0.500000
short bowel syndrome	0.500000
czech republic	0.100000
LOWER IN control	0.004545
control	0.004444
adult	0.004082
homo sapiens	0.002591
feces	0.002294

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
czech republic	1.000000
control	0.500000
short bowel syndrome	0.500000
LOWER IN short bowel syndrome	0.166667
LOWER IN control	0.166667

Number of experiments associating the term to the sequence

Term	Score
control	1.000000
LOWER IN short bowel syndrome	1.000000
feces	1.000000
homo sapiens	1.000000
adult	1.000000
czech republic	1.000000
short bowel syndrome	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
532	amnon	dominant feces, homo sapiens, control, adult, czech republic	2019-07-21	v1	1 / 16	approved	No
532	amnon	dominant feces, homo sapiens, adult, czech republic, short bowel syndrome	2019-07-21	v1	1 / 18	approved	No
532	amnon	common feces, homo sapiens, adult, czech republic, short bowel syndrome	2019-07-21	v1	1 / 24	approved	No
532	amnon	high in short bowel syndrome compared to control in feces homo sapiens adult czech republic	2019-07-21	v1	1 / 57	approved	No
532	amnon	common feces, homo sapiens, control, adult, czech republic	2019-07-21	v1	1 / 98	approved	No
532	amnon	high in control compared to short bowel syndrome in feces homo sapiens adult czech republic	2019-07-21	v1	1 / 334	approved	No

Problems / suggestions? Please visit the dbBact forum