Experiment ID: 503

Field Description
nameplasmodium berghei anka causes intestinal malaria associated with dysbiosis
sradrp003624
sraprjdb3900
datamd5c59a60098819d3eac1a1a752cba27207
mapmd50ee8430a25d9ac4178b4393685d0579d

Annotations for experiment:

term enrichment score
TermScore
LOWER IN malaria0.285714
malaria0.285714
balb/c0.181818
early time points0.181818
LOWER IN late time points0.181818
LOWER IN experimental cerebral malaria0.166667
experimental cerebral malaria0.166667
late time points0.153846
LOWER IN early time points0.153846
LOWER IN balb/c0.153846
LOWER IN c57bl/60.133333
japan0.080000
c57bl/60.076923
mouse0.029851
mus musculus0.027027
research facility0.010471
LOWER IN control0.009050
control0.008850
feces0.004608
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN balb/c0.333333
LOWER IN c57bl/60.200000
early time points0.166667
LOWER IN late time points0.166667
late time points0.125000
LOWER IN early time points0.125000
balb/c0.111111
japan0.041667
c57bl/60.041667
mouse0.015152
mus musculus0.013699
research facility0.005263
LOWER IN control0.004630
control0.004525
feces0.002309
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
research facility1.000000
mus musculus1.000000
mouse1.000000
japan1.000000
balb/c0.500000
c57bl/60.500000
control0.200000
early time points0.200000
LOWER IN late time points0.200000
LOWER IN malaria0.200000
late time points0.200000
malaria0.200000
LOWER IN control0.200000
LOWER IN early time points0.200000
LOWER IN c57bl/60.100000
LOWER IN experimental cerebral malaria0.100000
experimental cerebral malaria0.100000
LOWER IN balb/c0.100000
Number of experiments associating the term to the sequence
TermScore
feces1.000000
research facility1.000000
mus musculus1.000000
balb/c1.000000
mouse1.000000
japan1.000000
c57bl/61.000000
LOWER IN c57bl/61.000000
control1.000000
early time points1.000000
LOWER IN late time points1.000000
LOWER IN experimental cerebral malaria1.000000
LOWER IN malaria1.000000
late time points1.000000
experimental cerebral malaria1.000000
malaria1.000000
LOWER IN control1.000000
LOWER IN early time points1.000000
LOWER IN balb/c1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in feces research facility mus musculus balb/c mouse japan )2019-03-12v41 / 17approvedNo
503amnondominant feces, research facility, mus musculus, c57bl/6, mouse, japan2019-03-12v41 / 19approvedNo
503amnon high in c57bl/6 compared to balb/c in feces research facility mus musculus mouse japan 2019-03-12v41 / 21approvedNo
503amnondominant feces, research facility, mus musculus, balb/c, mouse, japan2019-03-12v41 / 21approvedNo
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in feces research facility mus musculus balb/c mouse japan )2019-03-12v41 / 29approvedNo
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in feces research facility mus musculus c57bl/6 mouse japan )2019-03-12v41 / 38approvedNo
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in feces research facility mus musculus c57bl/6 mouse japan )2019-03-12v41 / 58approvedNo
503amnon high in balb/c compared to c57bl/6 in feces research facility mus musculus mouse japan 2019-03-12v41 / 91approvedNo
503amnoncommon feces, research facility, mus musculus, c57bl/6, mouse, japan2019-03-12v41 / 210approvedNo
503amnoncommon feces, research facility, mus musculus, balb/c, mouse, japan2019-03-12v41 / 257approvedNo

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