dbBact

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Experiment ID: 480

Field	Description
name	phylogenetic and functional potential links ph and n2o emissions in pasture soils
sra	srp080971
datamd5	097c636fd526725b8031fd5c5cc1afc0
mapmd5	d2d1cb69882a5df8784eaab2650507d2

Annotations for experiment:

term enrichment score

Term	Score
pasture	0.500000
new zealand	0.232558
LOWER IN ph	0.200000
ph 6-7	0.187500
LOWER IN new zealand	0.181818
LOWER IN ireland	0.181818
ph	0.181818
LOWER IN ph 6-7	0.181818
ireland	0.171429
LOWER IN ph 5-6	0.153846
ph 5-6	0.153846
farm	0.045455
soil	0.019417

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN ph	0.500000
pasture	0.333333
LOWER IN new zealand	0.333333
LOWER IN ireland	0.333333
ph	0.333333
LOWER IN ph 6-7	0.333333
LOWER IN ph 5-6	0.200000
ph 5-6	0.200000
new zealand	0.142857
ph 6-7	0.125000
ireland	0.111111
farm	0.023256
soil	0.009804

Fraction of annotations for the query sequences containing the term

Term	Score
farm	1.000000
pasture	1.000000
soil	1.000000
new zealand	0.625000
ireland	0.375000
ph 6-7	0.375000
LOWER IN new zealand	0.125000
LOWER IN ireland	0.125000
ph	0.125000
LOWER IN ph 5-6	0.125000
ph 5-6	0.125000
LOWER IN ph	0.125000
LOWER IN ph 6-7	0.125000

Number of experiments associating the term to the sequence

Term	Score
farm	1.000000
pasture	1.000000
soil	1.000000
new zealand	1.000000
ireland	1.000000
LOWER IN new zealand	1.000000
ph 6-7	1.000000
LOWER IN ireland	1.000000
ph	1.000000
LOWER IN ph 5-6	1.000000
ph 5-6	1.000000
LOWER IN ph	1.000000
LOWER IN ph 6-7	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
480	amnon	high in ph 5-6 compared to ph ph 6-7 in farm pasture soil new zealand	2019-02-05	v4	1 / 6	approved	No
480	amnon	dominant farm, pasture, soil, new zealand	2019-02-05	v4	1 / 6	approved	No
480	amnon	dominant farm, pasture, soil, ireland	2019-02-05	v4	1 / 8	approved	No
480	amnon	high in ph ph 6-7 compared to ph 5-6 in farm pasture soil new zealand	2019-02-05	v4	1 / 13	approved	No
480	amnon	high in new zealand compared to ireland in farm pasture soil ph 6-7	2019-02-05	v4	1 / 20	approved	No
480	amnon	high in ireland compared to new zealand in farm pasture soil ph 6-7	2019-02-05	v4	1 / 94	approved	No
480	amnon	common farm, pasture, soil, ireland	2019-02-05	v4	1 / 816	approved	No
480	amnon	common farm, pasture, soil, new zealand	2019-02-05	v4	1 / 970	approved	No

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