Experiment ID: 477

Field Description
namegut microbiome transition across a lifestyle gradient in himalaya
sraerp111414
qiita11947
datamd55e75fe8d9574955f9d2005f3c6605d4f
mapmd510e5b67fbd8cb750abe51fc25a1f59dc

Annotations for experiment:

term enrichment score
TermScore
himalayas0.468085
nepal0.318841
chepang0.260870
tharu0.260870
agrarian0.260870
forager0.206897
raji0.200000
raute0.200000
LOWER IN nepal0.117647
LOWER IN himalayas0.117647
LOWER IN tharu0.117647
LOWER IN agrarian0.117647
LOWER IN chepang0.117647
LOWER IN forager0.117647
LOWER IN rural community0.068966
rural community0.058355
LOWER IN united states of america0.054054
adult0.004078
united states of america0.003313
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN nepal0.333333
LOWER IN himalayas0.333333
himalayas0.333333
chepang0.333333
raji0.333333
raute0.333333
tharu0.333333
agrarian0.333333
LOWER IN tharu0.333333
LOWER IN agrarian0.333333
LOWER IN chepang0.333333
LOWER IN forager0.333333
nepal0.200000
forager0.200000
LOWER IN rural community0.066667
LOWER IN united states of america0.043478
rural community0.030303
adult0.002045
united states of america0.001669
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
nepal0.785714
rural community0.785714
himalayas0.785714
adult0.714286
united states of america0.214286
forager0.214286
chepang0.214286
tharu0.214286
agrarian0.214286
raji0.142857
raute0.142857
LOWER IN nepal0.071429
LOWER IN himalayas0.071429
LOWER IN rural community0.071429
LOWER IN united states of america0.071429
LOWER IN tharu0.071429
LOWER IN agrarian0.071429
LOWER IN chepang0.071429
LOWER IN forager0.071429
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
feces1.000000
adult1.000000
united states of america1.000000
LOWER IN nepal1.000000
LOWER IN himalayas1.000000
LOWER IN rural community1.000000
nepal1.000000
rural community1.000000
himalayas1.000000
LOWER IN united states of america1.000000
forager1.000000
chepang1.000000
raji1.000000
raute1.000000
tharu1.000000
agrarian1.000000
LOWER IN tharu1.000000
LOWER IN agrarian1.000000
LOWER IN chepang1.000000
LOWER IN forager1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
477amnondominant homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v41 / 14approvedNo
477amnondominant homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v41 / 18approvedNo
477amnondominant homo sapiens, feces, adult, united states of america2019-01-28v41 / 19approvedNo
477amnondominant homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v41 / 19approvedNo
477amnonhigher in agrarian tharu population compared to foraging chepang population ( high in tharu agrarian compared to chepang forager in homo sapiens feces adult himalayas nepal rural community )2019-01-28v41 / 19approvedNo
477amnondominant homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v41 / 20approvedNo
477amnonlower in agrarian tharu population compared to foraging chepang population ( high in chepang forager compared to tharu agrarian in homo sapiens feces adult himalayas nepal rural community )2019-01-28v41 / 73approvedNo
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v41 / 74approvedNo
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v41 / 76approvedNo
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v41 / 88approvedNo
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v41 / 97approvedNo
477amnoncommon homo sapiens, feces, adult, united states of america2019-01-28v41 / 103approvedNo
477amnon high in nepal rural community himalayas compared to united states of america in homo sapiens feces adult 2019-01-28v41 / 111approvedNo
477amnon high in united states of america compared to nepal himalayas rural community in homo sapiens feces adult 2019-01-28v41 / 295approvedNo

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