Experiment ID: 435

Field Description
namemarginal zinc deficiency and environmentally relevant concentrations of arsenic elicit combined effects on the gut microbiome
sraprjna473851
datamd55af06a1006766222dc895bc6dfe539e3
mapmd5241a1f70f90eb1f97f872503ae891b74

Annotations for experiment:

term enrichment score
TermScore
age 9 weeks0.303030
LOWER IN age 9 weeks0.181818
LOWER IN zinc deficiency0.181818
LOWER IN low zinc diet0.181818
zinc deficiency0.181818
low zinc diet0.181818
LOWER IN age 4 weeks0.153846
state of oregon0.142857
age 4 weeks0.127660
c57bl/60.041667
mouse0.015152
mus musculus0.013699
female0.012500
research facility0.005236
LOWER IN control0.004474
control0.004376
united states of america0.003333
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN age 9 weeks0.333333
LOWER IN zinc deficiency0.333333
LOWER IN low zinc diet0.333333
zinc deficiency0.333333
low zinc diet0.333333
age 9 weeks0.200000
LOWER IN age 4 weeks0.200000
state of oregon0.076923
age 4 weeks0.076923
c57bl/60.021277
mouse0.007634
mus musculus0.006897
female0.006289
research facility0.002625
LOWER IN control0.002278
control0.002227
united states of america0.001669
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
research facility1.000000
c57bl/61.000000
female1.000000
united states of america1.000000
state of oregon1.000000
age 9 weeks0.625000
age 4 weeks0.375000
LOWER IN age 4 weeks0.125000
LOWER IN age 9 weeks0.125000
control0.125000
LOWER IN zinc deficiency0.125000
LOWER IN low zinc diet0.125000
zinc deficiency0.125000
low zinc diet0.125000
LOWER IN control0.125000
Number of experiments associating the term to the sequence
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
research facility1.000000
c57bl/61.000000
female1.000000
united states of america1.000000
state of oregon1.000000
age 9 weeks1.000000
LOWER IN age 4 weeks1.000000
age 4 weeks1.000000
LOWER IN age 9 weeks1.000000
control1.000000
LOWER IN zinc deficiency1.000000
LOWER IN low zinc diet1.000000
zinc deficiency1.000000
low zinc diet1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
435amnondominant mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-23v41 / 7approvedNo
435amnondominant mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-23v41 / 7approvedNo
435amnon high in zinc deficiency low zinc diet compared to control in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-23v41 / 7approvedNo
435amnon high in control compared to zinc deficiency low zinc diet in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-23v41 / 8approvedNo
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-23v41 / 15approvedNo
435amnonlower in mice at end of experiment compared to initial sample ( high in age 4 weeks compared to age 9 weeks in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse )2018-12-23v41 / 23approvedNo
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-23v41 / 30approvedNo
435amnonhigher in mice at end of experiment compared to initial sample ( high in age 9 weeks compared to age 4 weeks in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon )2018-12-23v41 / 73approvedNo

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