Experiment ID: 425

Field Description
namestunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa
sraprjeb27868
datamd56cfa5681f04146f16d0d76dabae81410
mapmd53a75ba2ce91bd304429c87afa4094e68

Annotations for experiment:

term enrichment score
TermScore
bangui0.437500
antananarivo0.400000
stunted growth0.400000
central african republic0.358974
madagascar0.285714
africa0.285714
LOWER IN madagascar0.181818
LOWER IN antananarivo0.181818
LOWER IN bangui0.181818
LOWER IN central african republic0.181818
duodenum0.113821
LOWER IN stunted growth0.100000
stomach0.076923
LOWER IN duodenum0.066667
LOWER IN feces0.041667
child0.031746
LOWER IN control0.008403
control0.008230
homo sapiens0.005168
feces0.004566
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN madagascar0.500000
bangui0.500000
LOWER IN antananarivo0.500000
antananarivo0.500000
LOWER IN bangui0.500000
LOWER IN central african republic0.500000
stunted growth0.500000
LOWER IN stunted growth0.500000
central african republic0.333333
madagascar0.250000
africa0.166667
LOWER IN duodenum0.083333
duodenum0.066667
stomach0.058824
LOWER IN feces0.033333
child0.016129
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
africa1.000000
child1.000000
feces0.500000
duodenum0.388889
central african republic0.388889
bangui0.388889
antananarivo0.333333
madagascar0.333333
stunted growth0.333333
LOWER IN madagascar0.111111
LOWER IN antananarivo0.111111
LOWER IN bangui0.111111
LOWER IN central african republic0.111111
stomach0.111111
LOWER IN feces0.055556
LOWER IN duodenum0.055556
control0.055556
LOWER IN stunted growth0.055556
LOWER IN control0.055556
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
africa1.000000
child1.000000
duodenum1.000000
LOWER IN feces1.000000
feces1.000000
central african republic1.000000
LOWER IN madagascar1.000000
bangui1.000000
LOWER IN antananarivo1.000000
LOWER IN duodenum1.000000
antananarivo1.000000
madagascar1.000000
LOWER IN bangui1.000000
LOWER IN central african republic1.000000
stunted growth1.000000
stomach1.000000
control1.000000
LOWER IN stunted growth1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
425amnonhigher in kids with stunted growth compared to non-stunted ( high in stunted growth compared to control in homo sapiens feces africa child )2018-12-08v41 / 2approvedNo
425amnondominant homo sapiens, feces, africa, child, central african republic, bangui2018-12-08v41 / 15approvedNo
425amnondominant homo sapiens, feces, africa, child, madagascar, antananarivo2018-12-08v41 / 15approvedNo
425amnonlower in kids with stunted growth compared to non-stunted ( high in control compared to stunted growth in homo sapiens feces africa child )2018-12-08v41 / 18approvedNo
425amnondominant homo sapiens, africa, child, duodenum, antananarivo, madagascar, stunted growth2018-12-08v41 / 22approvedNo
425amnondominant homo sapiens, africa, child, stunted growth, stomach, central african republic, bangui2018-12-08v41 / 23approvedNo
425amnondominant homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v41 / 25approvedNo
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens africa child duodenum 2018-12-08v41 / 33approvedNo
425amnoncommon homo sapiens, feces, africa, child, madagascar, antananarivo2018-12-08v41 / 73approvedNo
425amnoncommon homo sapiens, feces, africa, child, central african republic, bangui2018-12-08v41 / 79approvedNo
425amnon high in antananarivo madagascar compared to central african republic bangui in homo sapiens africa child duodenum 2018-12-08v41 / 103approvedNo
425amnoncommon homo sapiens, africa, child, stunted growth, stomach2018-12-08v41 / 111approvedNo
425amnoncommon homo sapiens, africa, child, duodenum, antananarivo, madagascar2018-12-08v41 / 123approvedNo
425amnoncommon homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v41 / 125approvedNo
425amnon high in antananarivo madagascar compared to bangui central african republic in homo sapiens feces africa child 2018-12-08v41 / 248approvedNo
425amnon high in feces compared to duodenum in homo sapiens africa child 2018-12-08v41 / 416approvedNo
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens feces africa child 2018-12-08v41 / 564approvedNo
425amnon high in duodenum compared to feces in homo sapiens africa child 2018-12-08v41 / 622approvedNo

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