Experiment ID: 409

Field Description
namespatial variation of the native colon microbiota in healthy adults
sraprjna418115
datamd566214211d64d561bb8b9dfd058a9cc19
mapmd5c7933f6d67802067610d348fba26f033

Annotations for experiment:

term enrichment score
TermScore
biopsy site0.237288
left colon0.193548
right colon0.162162
luminal content0.153846
LOWER IN luminal content0.153846
LOWER IN biopsy0.117647
LOWER IN biopsy site0.117647
LOWER IN left colon0.117647
biopsy0.108527
LOWER IN right colon0.105263
colon0.040000
LOWER IN feces0.028986
adult0.004076
united states of america0.003333
homo sapiens0.002591
feces0.002287
Fraction of dbbact annotations with this term covered by the query
TermScore
luminal content0.333333
LOWER IN luminal content0.333333
left colon0.142857
biopsy site0.142857
LOWER IN biopsy0.142857
LOWER IN biopsy site0.142857
LOWER IN left colon0.142857
right colon0.111111
LOWER IN right colon0.111111
biopsy0.058824
colon0.022222
LOWER IN feces0.016949
adult0.002045
united states of america0.001669
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
biopsy0.700000
biopsy site0.700000
adult0.600000
left colon0.300000
feces0.300000
right colon0.300000
colon0.200000
luminal content0.100000
LOWER IN biopsy0.100000
LOWER IN biopsy site0.100000
LOWER IN feces0.100000
LOWER IN luminal content0.100000
LOWER IN right colon0.100000
LOWER IN left colon0.100000
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
united states of america1.000000
adult1.000000
left colon1.000000
biopsy1.000000
biopsy site1.000000
feces1.000000
right colon1.000000
luminal content1.000000
LOWER IN biopsy1.000000
LOWER IN biopsy site1.000000
LOWER IN feces1.000000
LOWER IN luminal content1.000000
colon1.000000
LOWER IN right colon1.000000
LOWER IN left colon1.000000

Problems / suggestions? Please visit the dbBact forum