Experiment ID: 404

Field Description
namegut microbiota is associated with obesity and cardiometabolic disease in a population in the midst of westernization
qiita11993
datamd55203632c5d1116d9bed12824ef3de304
mapmd5e6da38d7e8edd3c825b08f947d63810f

Annotations for experiment:

term enrichment score
TermScore
colombia0.279070
columbia0.200000
bogota0.125000
LOWER IN municipality of santiago de cali0.125000
LOWER IN bucaramanga0.125000
LOWER IN barranquilla0.125000
municipality of santiago de cali0.125000
bucaramanga0.125000
barranquilla0.125000
LOWER IN bogota0.125000
LOWER IN medellin metropolitan area0.125000
low fiber0.125000
high filber0.125000
LOWER IN low fiber0.125000
high hdl0.125000
LOWER IN low hdl0.125000
low hdl0.125000
LOWER IN high hdl0.125000
medellin metropolitan area0.117647
lean body mass0.117647
LOWER IN plant fiber cell0.117647
hard stool0.117647
LOWER IN normal stool0.117647
plant fiber cell0.117647
normal stool0.117647
LOWER IN hard stool0.117647
LOWER IN lean body mass0.117647
LOWER IN high fiber0.100000
low bmi0.086957
LOWER IN low bmi0.086957
LOWER IN high bmi0.083333
city0.080000
high bmi0.071429
obesity0.068966
LOWER IN male0.050000
LOWER IN female0.046512
male0.031250
female0.021277
adult0.008130
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
bogota0.500000
LOWER IN municipality of santiago de cali0.500000
LOWER IN bucaramanga0.500000
LOWER IN barranquilla0.500000
municipality of santiago de cali0.500000
bucaramanga0.500000
barranquilla0.500000
LOWER IN bogota0.500000
LOWER IN medellin metropolitan area0.500000
low fiber0.500000
high filber0.500000
LOWER IN low fiber0.500000
high hdl0.500000
LOWER IN low hdl0.500000
low hdl0.500000
LOWER IN high hdl0.500000
medellin metropolitan area0.333333
lean body mass0.333333
LOWER IN plant fiber cell0.333333
hard stool0.333333
LOWER IN normal stool0.333333
columbia0.333333
plant fiber cell0.333333
normal stool0.333333
LOWER IN hard stool0.333333
LOWER IN lean body mass0.333333
colombia0.166667
LOWER IN high fiber0.166667
low bmi0.111111
LOWER IN low bmi0.111111
LOWER IN high bmi0.100000
high bmi0.071429
obesity0.066667
city0.041667
LOWER IN male0.038462
LOWER IN female0.034483
male0.020000
female0.012500
adult0.004082
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
city1.000000
adult1.000000
colombia0.857143
columbia0.142857
bogota0.071429
medellin metropolitan area0.071429
LOWER IN municipality of santiago de cali0.071429
LOWER IN bucaramanga0.071429
LOWER IN barranquilla0.071429
female0.071429
LOWER IN male0.071429
lean body mass0.071429
low bmi0.071429
LOWER IN high bmi0.071429
municipality of santiago de cali0.071429
bucaramanga0.071429
barranquilla0.071429
LOWER IN bogota0.071429
LOWER IN medellin metropolitan area0.071429
low fiber0.071429
LOWER IN high fiber0.071429
LOWER IN plant fiber cell0.071429
hard stool0.071429
LOWER IN normal stool0.071429
plant fiber cell0.071429
high filber0.071429
LOWER IN low fiber0.071429
normal stool0.071429
LOWER IN hard stool0.071429
high hdl0.071429
LOWER IN low hdl0.071429
high bmi0.071429
obesity0.071429
LOWER IN lean body mass0.071429
LOWER IN low bmi0.071429
male0.071429
LOWER IN female0.071429
low hdl0.071429
LOWER IN high hdl0.071429
Number of experiments associating the term to the sequence
TermScore
bogota1.000000
medellin metropolitan area1.000000
LOWER IN municipality of santiago de cali1.000000
LOWER IN bucaramanga1.000000
LOWER IN barranquilla1.000000
feces1.000000
homo sapiens1.000000
city1.000000
adult1.000000
colombia1.000000
female1.000000
LOWER IN male1.000000
lean body mass1.000000
low bmi1.000000
LOWER IN high bmi1.000000
municipality of santiago de cali1.000000
bucaramanga1.000000
barranquilla1.000000
LOWER IN bogota1.000000
LOWER IN medellin metropolitan area1.000000
low fiber1.000000
LOWER IN high fiber1.000000
LOWER IN plant fiber cell1.000000
hard stool1.000000
LOWER IN normal stool1.000000
columbia1.000000
plant fiber cell1.000000
high filber1.000000
LOWER IN low fiber1.000000
normal stool1.000000
LOWER IN hard stool1.000000
high hdl1.000000
LOWER IN low hdl1.000000
high bmi1.000000
obesity1.000000
LOWER IN lean body mass1.000000
LOWER IN low bmi1.000000
male1.000000
LOWER IN female1.000000
low hdl1.000000
LOWER IN high hdl1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
404amnonnegatively correlated with hdl levels ( high in low hdl compared to high hdl in feces homo sapiens city adult colombia )2019-01-10v41 / 4approvedNo
404amnon high in male compared to female in feces homo sapiens city adult colombia 2018-11-20v41 / 13approvedNo
404amnon high in high bmi obesity compared to lean body mass low bmi in feces homo sapiens city adult colombia 2018-11-20v41 / 14approvedNo
404amnonpositively correlated with hdl levels ( high in high hdl compared to low hdl in feces homo sapiens city adult colombia )2019-01-10v41 / 17approvedNo
404amnondominant feces, homo sapiens, city, adult, colombia2018-11-20v41 / 19approvedNo
404amnon high in normal stool compared to hard stool in feces homo sapiens city adult columbia 2018-11-20v41 / 21approvedNo
404amnonpositively correlated with fiber intake ( high in plant fiber cell high filber compared to low fiber in feces homo sapiens city adult colombia )2018-11-20v41 / 22approvedNo
404amnon high in hard stool compared to normal stool in feces homo sapiens city adult columbia 2018-11-20v41 / 27approvedNo
404amnonnegatively correlated with fiber intake ( high in low fiber compared to high fiber plant fiber cell in feces homo sapiens city adult colombia )2018-11-20v41 / 32approvedNo
404amnon high in municipality of santiago de cali bucaramanga barranquilla compared to bogota medellin metropolitan area in feces homo sapiens city adult colombia 2018-11-20v41 / 71approvedNo
404amnoncommon feces, homo sapiens, city, adult, colombia2018-11-20v41 / 79approvedNo
404amnon high in lean body mass low bmi compared to high bmi in feces homo sapiens city adult colombia 2018-11-20v41 / 84approvedNo
404amnon high in female compared to male in feces homo sapiens city adult colombia 2018-11-20v41 / 88approvedNo
404amnon high in bogota medellin metropolitan area compared to municipality of santiago de cali bucaramanga barranquilla in feces homo sapiens city adult colombia 2018-11-20v41 / 237approvedNo

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