Experiment ID: 400

Field Description
nameus immigration westernizes the human gut microbiome
sraprjeb28687
datamd540c0ce1b6815815e744fc170d8a379b8
mapmd5e8215641b4960b1727ffde73a840e12c

Annotations for experiment:

term enrichment score
TermScore
hmong0.307692
karen0.260870
myanmar0.260870
LOWER IN hmong0.200000
LOWER IN karen0.117647
LOWER IN myanmar0.117647
LOWER IN hmong 2nd generation0.117647
hmong 2nd generation0.117647
LOWER IN thailand0.105263
LOWER IN china0.095238
thailand0.088670
LOWER IN rural community0.068966
LOWER IN united states of america0.066667
low bmi0.064516
LOWER IN low bmi0.064516
LOWER IN high bmi0.060606
rural community0.053097
high bmi0.048780
female0.012397
china0.004677
adult0.004075
united states of america0.003320
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
karen0.333333
myanmar0.333333
LOWER IN hmong0.333333
hmong0.333333
LOWER IN karen0.333333
LOWER IN myanmar0.333333
LOWER IN hmong 2nd generation0.333333
hmong 2nd generation0.333333
LOWER IN thailand0.200000
LOWER IN china0.142857
LOWER IN rural community0.066667
low bmi0.058824
LOWER IN low bmi0.058824
LOWER IN high bmi0.052632
thailand0.047619
LOWER IN united states of america0.043478
high bmi0.037037
rural community0.030303
female0.006289
china0.002364
adult0.002045
united states of america0.001669
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
thailand0.642857
adult0.571429
female0.428571
united states of america0.285714
hmong0.285714
rural community0.214286
karen0.214286
myanmar0.214286
china0.214286
LOWER IN united states of america0.142857
LOWER IN hmong0.142857
LOWER IN thailand0.071429
LOWER IN rural community0.071429
LOWER IN china0.071429
LOWER IN karen0.071429
LOWER IN myanmar0.071429
low bmi0.071429
LOWER IN high bmi0.071429
LOWER IN hmong 2nd generation0.071429
hmong 2nd generation0.071429
high bmi0.071429
LOWER IN low bmi0.071429
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
feces1.000000
thailand1.000000
rural community1.000000
LOWER IN united states of america1.000000
united states of america1.000000
LOWER IN thailand1.000000
LOWER IN rural community1.000000
karen1.000000
myanmar1.000000
LOWER IN hmong1.000000
LOWER IN china1.000000
hmong1.000000
LOWER IN karen1.000000
LOWER IN myanmar1.000000
china1.000000
female1.000000
adult1.000000
low bmi1.000000
LOWER IN high bmi1.000000
LOWER IN hmong 2nd generation1.000000
hmong 2nd generation1.000000
high bmi1.000000
LOWER IN low bmi1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
400amnonpositively correlated with bmi ( high in high bmi compared to low bmi in homo sapiens feces thailand adult )2018-11-18v41 / 6approvedNo
400amnonhigh freq. in hmong (chinese) females from thailand (dominant homo sapiens, feces, adult, female, thailand, hmong, china)2018-11-18v41 / 13approvedNo
400amnonhigh freq. in karen (burma) females from thailand (dominant homo sapiens, feces, adult, female, thailand, karen, myanmar)2018-11-18v41 / 14approvedNo
400amnonhigh freq. in feces of european american females (dominant homo sapiens, feces, united states of america, adult, female)2018-11-18v41 / 17approvedNo
400amnonhigher in children of hmong migrands born in the usa compared to non-migrant usa people ( high in hmong 2nd generation hmong compared to united states of america in homo sapiens feces )2018-11-18v41 / 41approvedNo
400amnonlower in children of hmong migrands born in the usa compared to non-migrant usa people ( high in united states of america compared to hmong 2nd generation hmong in homo sapiens feces )2018-11-18v41 / 52approvedNo
400amnonnegatively correlated with bmi ( high in low bmi compared to high bmi in homo sapiens feces thailand adult )2018-11-18v41 / 70approvedNo
400amnoncommon in feces of european american females (common homo sapiens, feces, united states of america, adult, female)2018-11-18v41 / 95approvedNo
400amnoncommon in hmong (chinese) females from thailand (common homo sapiens, feces, adult, female, thailand, hmong, china)2018-11-18v41 / 95approvedNo
400amnoncommon in karen (burma) females from thailand (common feces, homo sapiens, female, adult, myanmar, thailand, karen)2018-11-18v41 / 132approvedNo
400amnonhigher in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in hmong china compared to karen myanmar in homo sapiens feces thailand rural community )2018-11-18v41 / 135approvedNo
400amnonlower in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in karen myanmar compared to hmong china in homo sapiens feces thailand rural community )2018-11-18v41 / 329approvedNo
400amnonlower in people from thailand compared to 2nd generation immigrants to usa ( high in united states of america compared to thailand rural community in homo sapiens feces )2018-11-18v41 / 343approvedNo
400amnonhigher in people from thailand compared to 2nd generation immigrants to usa ( high in thailand rural community compared to united states of america in homo sapiens feces )2018-11-18v41 / 378approvedNo

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