dbBact

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Experiment ID: 40

Field	Description
name	using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wilt
sra	srp066888
sra	prjna275515
datamd5	e1e8f10a192f7f6b6e798318f18b4750
mapmd5	b3b4703ddc0fb134db3bdb6bb6d4e1ca

Annotations for experiment:

term enrichment score

Term	Score
field soil	0.500000
nicotiana tabacum	0.333333
LOWER IN disease	0.142857
disease	0.111111
rhizosphere	0.019608
soil	0.009804
china	0.004717
LOWER IN control	0.004525
control	0.004425

Fraction of dbbact annotations with this term covered by the query

Term	Score
field soil	0.333333
nicotiana tabacum	0.200000
LOWER IN disease	0.090909
disease	0.066667
rhizosphere	0.009901
soil	0.004926
china	0.002364
LOWER IN control	0.002278
control	0.002227

Fraction of annotations for the query sequences containing the term

Term	Score
soil	1.000000
field soil	1.000000
nicotiana tabacum	1.000000
rhizosphere	1.000000
china	1.000000
control	0.333333
LOWER IN disease	0.333333
LOWER IN control	0.333333
disease	0.333333

Number of experiments associating the term to the sequence

Term	Score
soil	1.000000
field soil	1.000000
nicotiana tabacum	1.000000
rhizosphere	1.000000
china	1.000000
control	1.000000
LOWER IN disease	1.000000
LOWER IN control	1.000000
disease	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
40	amnon	higher in soil susceptible to tobacco bacterial wilt disease ( high in disease compared to control in soil field soil nicotiana tabacum rhizosphere china )	2016-12-09	v4	1 / 3	approved	No
40	amnon	higher in soil protective from tobacco bacterial wilt disease ( high in control compared to disease in soil field soil nicotiana tabacum rhizosphere china )	2016-12-09	v4	1 / 9	approved	No
40	amnon	common soil, field soil, nicotiana tabacum, rhizosphere, china	2016-12-09	v4	1 / 1420	approved	No

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