Experiment ID: 384

Field Description
namelung microbiome is influenced by the environment and asthmatic status in an equine model of asthma
sraprjna361129
datamd5cd1c3e9f464bd8427203de5bb5d0eb49
mapmd5820751cade1bb170934aac508c58283e

Annotations for experiment:

term enrichment score
TermScore
barn0.400000
hay0.285714
pasture0.260870
LOWER IN barn0.181818
LOWER IN pasture0.181818
LOWER IN hay0.153846
LOWER IN asthma0.105263
asthma0.105263
horse0.100000
LOWER IN nasal cavity0.095238
equus caballus0.090909
LOWER IN oral cavity0.074074
LOWER IN pair of nares0.074074
LOWER IN mouth0.068966
pair of nares0.068293
nasal cavity0.068293
oral cavity0.048443
mouth0.039387
LOWER IN saliva0.036364
canada0.028571
farm0.023256
saliva0.014839
LOWER IN control0.004396
control0.004301
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN barn0.333333
barn0.333333
LOWER IN pasture0.333333
LOWER IN asthma0.333333
asthma0.333333
LOWER IN nasal cavity0.200000
pasture0.200000
LOWER IN hay0.200000
hay0.200000
LOWER IN oral cavity0.090909
LOWER IN pair of nares0.090909
LOWER IN mouth0.076923
horse0.052632
equus caballus0.047619
pair of nares0.037037
nasal cavity0.037037
LOWER IN saliva0.025641
oral cavity0.025641
mouth0.020408
canada0.014493
farm0.011765
saliva0.007519
LOWER IN control0.002278
control0.002227
Fraction of annotations for the query sequences containing the term
TermScore
equus caballus1.000000
horse1.000000
canada1.000000
farm1.000000
saliva0.562500
mouth0.562500
barn0.500000
hay0.500000
pair of nares0.437500
nasal cavity0.437500
oral cavity0.437500
pasture0.375000
LOWER IN barn0.125000
LOWER IN hay0.125000
LOWER IN pasture0.125000
LOWER IN oral cavity0.062500
LOWER IN saliva0.062500
LOWER IN mouth0.062500
LOWER IN pair of nares0.062500
LOWER IN nasal cavity0.062500
control0.062500
LOWER IN asthma0.062500
LOWER IN control0.062500
asthma0.062500
Number of experiments associating the term to the sequence
TermScore
equus caballus1.000000
horse1.000000
canada1.000000
farm1.000000
pair of nares1.000000
nasal cavity1.000000
LOWER IN oral cavity1.000000
LOWER IN saliva1.000000
LOWER IN mouth1.000000
oral cavity1.000000
saliva1.000000
LOWER IN pair of nares1.000000
LOWER IN nasal cavity1.000000
mouth1.000000
pasture1.000000
LOWER IN barn1.000000
LOWER IN hay1.000000
barn1.000000
hay1.000000
LOWER IN pasture1.000000
control1.000000
LOWER IN asthma1.000000
LOWER IN control1.000000
asthma1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
384amnon high in asthma compared to control in equus caballus horse canada farm oral cavity saliva hay barn mouth 2018-10-23v41 / 1approvedNo
384amnon high in control compared to asthma in equus caballus horse canada farm oral cavity saliva hay barn mouth 2018-10-23v41 / 6approvedNo
384amnondominant equus caballus, horse, canada, farm, nasal cavity, pair of nares, barn, hay2018-10-22v41 / 11approvedNo
384amnondominant equus caballus, horse, canada, farm, nasal cavity, pair of nares, pasture2018-10-22v41 / 14approvedNo
384amnondominant equus caballus, horse, canada, farm, barn, hay, oral cavity, saliva, mouth2018-10-22v41 / 15approvedNo
384amnondominant equus caballus, horse, canada, farm, oral cavity, saliva, pasture, mouth2018-10-22v41 / 18approvedNo
384amnoncommon equus caballus, horse, canada, farm, nasal cavity, pair of nares, barn, hay2018-10-22v41 / 131approvedNo
384amnon high in barn hay compared to pasture in equus caballus horse canada farm nasal cavity pair of nares 2018-10-22v41 / 161approvedNo
384amnoncommon equus caballus, horse, canada, farm, nasal cavity, pair of nares, pasture2018-10-22v41 / 175approvedNo
384amnoncommon equus caballus, horse, canada, farm, oral cavity, saliva, pasture, mouth2018-10-22v41 / 201approvedNo
384amnon high in pasture compared to barn hay in equus caballus horse canada farm saliva mouth 2018-10-22v41 / 245approvedNo
384amnoncommon equus caballus, horse, canada, farm, barn, hay, oral cavity, saliva, mouth2018-10-22v41 / 274approvedNo
384amnon high in barn hay compared to pasture in equus caballus horse canada farm saliva mouth 2018-10-22v41 / 283approvedNo
384amnon high in pasture compared to barn hay in equus caballus horse canada farm nasal cavity pair of nares 2018-10-22v41 / 304approvedNo
384amnon high in oral cavity saliva mouth compared to pair of nares nasal cavity in equus caballus horse canada farm 2018-10-22v41 / 604approvedNo
384amnon high in pair of nares nasal cavity compared to oral cavity saliva mouth in equus caballus horse canada farm 2018-10-22v41 / 791approvedNo

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