dbBact

This is the development server

Experiment ID: 380

Field	Description
name	correlations between gut microbiota community structures of tibetans and geography
sra	sra551593
datamd5	b22fca2abe59f2f8f9ddbb8778b8af89
mapmd5	cff9ecc3da1f8e6cfe941c59c3f3b825

Annotations for experiment:

term enrichment score

Term	Score
tibet autonomous region	0.333333
LOWER IN gangcha region	0.333333
gangcha region	0.333333
LOWER IN gannan tibetan autonomous prefecture	0.333333
gannan tibetan autonomous prefecture	0.285714
tibetan plateau	0.285714
adult	0.008130
homo sapiens	0.005168
feces	0.004577

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN gangcha region	0.500000
gangcha region	0.500000
LOWER IN gannan tibetan autonomous prefecture	0.500000
gannan tibetan autonomous prefecture	0.333333
tibet autonomous region	0.200000
tibetan plateau	0.166667
adult	0.004082
homo sapiens	0.002591
feces	0.002294

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
tibetan plateau	1.000000
tibet autonomous region	1.000000
gannan tibetan autonomous prefecture	0.250000
LOWER IN gangcha region	0.250000
gangcha region	0.250000
LOWER IN gannan tibetan autonomous prefecture	0.250000

Number of experiments associating the term to the sequence

Term	Score
gannan tibetan autonomous prefecture	1.000000
LOWER IN gangcha region	1.000000
feces	1.000000
homo sapiens	1.000000
adult	1.000000
tibetan plateau	1.000000
tibet autonomous region	1.000000
gangcha region	1.000000
LOWER IN gannan tibetan autonomous prefecture	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
380	amnon	dominant feces, homo sapiens, adult, tibetan plateau, tibet autonomous region	2018-10-03	v4	1 / 15	approved	No
380	amnon	common feces, homo sapiens, adult, tibetan plateau, tibet autonomous region	2018-10-03	v4	1 / 63	approved	No
380	amnon	high in gangcha region compared to gannan tibetan autonomous prefecture in feces homo sapiens adult tibetan plateau tibet autonomous region	2018-10-03	v4	1 / 114	approved	No
380	amnon	high in gannan tibetan autonomous prefecture compared to gangcha region in feces homo sapiens adult tibetan plateau tibet autonomous region	2018-10-03	v4	1 / 123	approved	No

Problems / suggestions? Please visit the dbBact forum