Experiment ID: 371

Field Description
namechanges in the gut microbiota of urban subjects during an immersion in the traditional diet and lifestyle of a rainforest village
sraerp110254
qiita11874
datamd579fa547ca866379fdb8575136fe033cc
mapmd5b9a4450f43e7e96edcb537032ebe3032

Annotations for experiment:

term enrichment score
TermScore
venezuela0.320988
amerindian0.320988
LOWER IN amerindian0.240000
LOWER IN venezuela0.240000
LOWER IN hunter gatherer0.193548
hunter gatherer0.163522
LOWER IN obsolete_juvenile stage0.153846
LOWER IN city0.082192
obsolete_juvenile stage0.074074
LOWER IN united states of america0.070588
LOWER IN infant0.057143
city0.038217
LOWER IN adult0.035088
infant0.024691
skin0.022472
saliva0.014742
adult0.004024
united states of america0.003309
homo sapiens0.002591
feces0.002289
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN amerindian0.333333
LOWER IN venezuela0.333333
venezuela0.200000
amerindian0.200000
LOWER IN hunter gatherer0.200000
LOWER IN obsolete_juvenile stage0.200000
hunter gatherer0.090909
LOWER IN city0.052632
obsolete_juvenile stage0.052632
LOWER IN united states of america0.043478
LOWER IN infant0.037037
city0.021277
LOWER IN adult0.020408
infant0.013699
skin0.011765
saliva0.007519
adult0.002045
united states of america0.001669
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
venezuela0.812500
hunter gatherer0.812500
amerindian0.812500
feces0.375000
saliva0.375000
skin0.250000
LOWER IN city0.187500
LOWER IN united states of america0.187500
united states of america0.187500
city0.187500
LOWER IN amerindian0.187500
LOWER IN hunter gatherer0.187500
LOWER IN venezuela0.187500
adult0.125000
LOWER IN infant0.125000
LOWER IN obsolete_juvenile stage0.125000
obsolete_juvenile stage0.125000
infant0.125000
LOWER IN adult0.125000
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
skin1.000000
venezuela1.000000
hunter gatherer1.000000
amerindian1.000000
LOWER IN city1.000000
LOWER IN united states of america1.000000
feces1.000000
united states of america1.000000
city1.000000
LOWER IN amerindian1.000000
LOWER IN hunter gatherer1.000000
LOWER IN venezuela1.000000
saliva1.000000
adult1.000000
LOWER IN infant1.000000
LOWER IN obsolete_juvenile stage1.000000
obsolete_juvenile stage1.000000
infant1.000000
LOWER IN adult1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
371amnondominant feces, homo sapiens, hunter gatherer, amerindian, venezuela2018-09-06v41 / 11approvedNo
371amnondominant homo sapiens, skin, amerindian, hunter gatherer, venezuela2018-09-06v41 / 14approvedNo
371amnondominant homo sapiens, venezuela, hunter gatherer, amerindian, saliva2018-09-06v41 / 15approvedNo
371amnonNEGATIVELY correlated with age in amerindians ( high in infant obsolete_juvenile stage compared to adult in feces homo sapiens venezuela hunter gatherer amerindian )2018-09-06v41 / 15approvedNo
371amnonnegatively correlated with age in amerindian saliva ( high in obsolete_juvenile stage infant compared to adult in homo sapiens venezuela hunter gatherer amerindian saliva )2018-09-06v41 / 16approvedNo
371amnonpositively correlated with age in amerindian saliva ( high in adult compared to obsolete_juvenile stage infant in homo sapiens venezuela hunter gatherer amerindian saliva )2018-09-06v41 / 17approvedNo
371amnonhigher in saliva of amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in homo sapiens saliva )2018-09-06v41 / 24approvedNo
371amnonpositively correlated with age in amerindians ( high in adult compared to infant obsolete_juvenile stage in feces homo sapiens venezuela hunter gatherer amerindian )2018-09-06v41 / 27approvedNo
371amnoncommon homo sapiens, venezuela, hunter gatherer, amerindian, saliva2018-09-06v41 / 43approvedNo
371amnonlower in saliva of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens saliva )2018-09-06v41 / 60approvedNo
371amnoncommon feces, homo sapiens, hunter gatherer, amerindian, venezuela2018-09-06v41 / 121approvedNo
371amnoncommon homo sapiens, skin, amerindian, hunter gatherer, venezuela2018-09-06v41 / 195approvedNo
371amnonlower in skin of amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in homo sapiens skin )2018-09-06v41 / 195approvedNo
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in feces homo sapiens )2018-09-06v41 / 417approvedNo
371amnonhigher in amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in feces homo sapiens )2018-09-06v41 / 443approvedNo
371amnonhigher in skin of amerindians compared to western visitors ( high in venezuela hunter gatherer amerindian compared to city united states of america in homo sapiens skin )2018-09-06v41 / 854approvedNo

Problems / suggestions? Please visit the dbBact forum