Experiment ID: 360

Field Description
nameplant compartment and biogeography affect microbiome composition in cultivated and native agave species
sraprjna266662
datamd5b42ab34a5f5bb09ebcceff9d052021f8
mapmd55d504fe2b9d856ac9f7e1e9cd6af7ff8

Annotations for experiment:

term enrichment score
TermScore
agave0.457627
guanajuato0.433962
agave deserti0.262295
agave salmiana0.262295
agave tequiliana0.262295
root endosphere0.151899
leaf endosphere0.151899
leaf surface0.140000
desert0.125000
cultivated environment0.108911
mexico0.098182
root0.056872
LOWER IN agave0.050000
LOWER IN leaf surface0.047619
leaf0.043624
LOWER IN leaf0.040000
LOWER IN soil0.038835
LOWER IN spring season0.034483
spring season0.031250
state of california0.029712
LOWER IN rhizosphere0.026316
summer season0.021739
LOWER IN summer season0.021739
rhizosphere0.019027
soil0.009748
Fraction of dbbact annotations with this term covered by the query
TermScore
guanajuato0.333333
agave0.333333
LOWER IN agave0.333333
agave deserti0.333333
agave salmiana0.333333
agave tequiliana0.333333
LOWER IN leaf surface0.200000
root endosphere0.142857
leaf endosphere0.142857
leaf surface0.111111
LOWER IN leaf0.076923
desert0.066667
cultivated environment0.066667
mexico0.052632
LOWER IN spring season0.047619
spring season0.037037
root0.034483
LOWER IN soil0.030303
LOWER IN rhizosphere0.025641
leaf0.023256
summer season0.018182
LOWER IN summer season0.018182
state of california0.015385
rhizosphere0.009901
soil0.004926
Fraction of annotations for the query sequences containing the term
TermScore
desert1.000000
mexico0.729730
agave0.729730
guanajuato0.621622
soil0.459459
state of california0.432432
leaf0.351351
cultivated environment0.297297
rhizosphere0.243243
agave deserti0.216216
agave salmiana0.216216
agave tequiliana0.216216
leaf surface0.189189
root endosphere0.162162
root0.162162
leaf endosphere0.162162
LOWER IN soil0.054054
LOWER IN leaf0.027027
LOWER IN leaf surface0.027027
LOWER IN agave0.027027
LOWER IN rhizosphere0.027027
summer season0.027027
LOWER IN spring season0.027027
LOWER IN summer season0.027027
spring season0.027027
Number of experiments associating the term to the sequence
TermScore
soil1.000000
LOWER IN leaf1.000000
LOWER IN leaf surface1.000000
desert1.000000
state of california1.000000
mexico1.000000
guanajuato1.000000
agave1.000000
LOWER IN agave1.000000
LOWER IN rhizosphere1.000000
agave deserti1.000000
leaf1.000000
leaf surface1.000000
LOWER IN soil1.000000
rhizosphere1.000000
cultivated environment1.000000
agave salmiana1.000000
summer season1.000000
LOWER IN spring season1.000000
agave tequiliana1.000000
LOWER IN summer season1.000000
spring season1.000000
root endosphere1.000000
root1.000000
leaf endosphere1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
360amnondominant desert, soil, rhizosphere, agave, agave deserti, state of california2018-08-21v41 / 3approvedNo
360amnondominant desert, soil, mexico, guanajuato, cultivated environment2018-08-21v41 / 4approvedNo
360amnondominant desert, soil, state of california2018-08-21v41 / 4approvedNo
360amnondominant desert, soil, mexico, guanajuato2018-08-21v41 / 4approvedNo
360amnondominant agave, desert, state of california, agave deserti, leaf, leaf surface2018-08-21v41 / 6approvedNo
360amnondominant desert, soil, mexico, guanajuato, cultivated environment2018-08-21v41 / 6approvedNo
360amnondominant desert, soil, rhizosphere, agave, agave salmiana, mexico, guanajuato2018-08-21v41 / 9approvedNo
360amnondominant agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 10approvedNo
360amnondominant desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 12approvedNo
360amnondominant agave, desert, root endosphere, agave deserti, state of california, root2018-08-21v41 / 13approvedNo
360amnondominant agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root2018-08-21v41 / 13approvedNo
360amnondominant agave, desert, leaf, leaf surface, agave salmiana, mexico, guanajuato2018-08-21v41 / 14approvedNo
360amnondominant agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave salmiana2018-08-21v41 / 15approvedNo
360amnondominant agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v41 / 16approvedNo
360amnondominant agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v41 / 17approvedNo
360amnondominant agave, agave deserti, leaf, leaf endosphere, desert, state of california2018-08-20v41 / 30approvedNo
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave salmiana2018-08-21v41 / 39approvedNo
360amnoncommon agave, agave deserti, leaf, leaf endosphere, desert, state of california2018-08-20v41 / 48approvedNo
360amnoncommon agave, desert, root endosphere, agave deserti, state of california, root2018-08-21v41 / 52approvedNo
360amnoncommon agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v41 / 62approvedNo
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v41 / 78approvedNo
360amnoncommon agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root2018-08-21v41 / 87approvedNo
360amnon high in spring season compared to summer season in desert mexico state of california soil rhizosphere 2018-08-21v41 / 97approvedNo
360amnoncommon desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 98approvedNo
360amnoncommon agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 210approvedNo
360amnon high in summer season compared to spring season in desert mexico state of california soil rhizosphere 2018-08-21v41 / 214approvedNo
360amnoncommon desert, soil, rhizosphere, agave, agave deserti, state of california2018-08-21v41 / 432approvedNo
360amnoncommon desert, soil, mexico, guanajuato2018-08-21v41 / 437approvedNo
360amnoncommon desert, soil, rhizosphere, agave, agave salmiana, mexico, guanajuato2018-08-21v41 / 484approvedNo
360amnoncommon agave, desert, leaf, leaf surface, agave salmiana, mexico, guanajuato2018-08-21v41 / 492approvedNo
360amnoncommon desert, soil, mexico, guanajuato, cultivated environment2018-08-21v41 / 500approvedNo
360amnon high in rhizosphere agave compared to soil in desert mexico state of california 2018-08-21v41 / 593approvedNo
360amnoncommon desert, soil, state of california2018-08-21v41 / 637approvedNo
360amnonhigher in leaf surface compared to soil in agave plants ( high in leaf leaf surface compared to soil in desert state of california mexico guanajuato agave )2018-08-21v41 / 645approvedNo
360amnoncommon agave, desert, state of california, agave deserti, leaf, leaf surface2018-08-21v41 / 649approvedNo
360amnon high in soil compared to agave rhizosphere in desert mexico state of california 2018-08-21v41 / 992approvedNo
360amnonlower in leaf surface compared to soil in agave plants ( high in soil compared to leaf leaf surface in desert state of california mexico guanajuato agave )2018-08-21v41 / 1108approvedNo

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