dbBact

This is the development server

Experiment ID: 347

Field	Description
name	disentangling the complexity of permafrost soil by using high resolution profiling of microbial community composition, key functions and respiration rates
sra	prjeb21759
datamd5	25f8c31c72001f97d0f382631e749647
mapmd5	a6c9dbf4a193021b750bd72754e0d12f

Annotations for experiment:

term enrichment score

Term	Score
svalbard archipelago	0.666667
permafrost	0.400000
depth 100-150cm	0.333333
depth 150-200cm	0.333333
depth (soil) 20-30cm	0.285714
LOWER IN depth (soil) 20-30cm	0.250000
permafrost active layer	0.250000
kingdom of norway	0.222222
LOWER IN depth 100-150cm	0.142857
LOWER IN depth 150-200cm	0.142857
LOWER IN permafrost transition layer	0.142857
permafrost transition layer	0.142857
LOWER IN depth (soil) 0-20cm	0.100000
depth (soil) 0-20cm	0.083333
soil	0.019417

Fraction of dbbact annotations with this term covered by the query

Term	Score
svalbard archipelago	0.500000
LOWER IN depth 100-150cm	0.500000
LOWER IN depth 150-200cm	0.500000
LOWER IN permafrost transition layer	0.500000
permafrost transition layer	0.500000
LOWER IN depth (soil) 20-30cm	0.500000
permafrost active layer	0.500000
depth 100-150cm	0.500000
depth 150-200cm	0.500000
permafrost	0.250000
depth (soil) 20-30cm	0.250000
kingdom of norway	0.125000
LOWER IN depth (soil) 0-20cm	0.125000
depth (soil) 0-20cm	0.050000
soil	0.009804

Fraction of annotations for the query sequences containing the term

Term	Score
kingdom of norway	1.000000
svalbard archipelago	1.000000
permafrost	1.000000
soil	1.000000
depth (soil) 20-30cm	0.333333
depth (soil) 0-20cm	0.250000
depth 100-150cm	0.250000
depth 150-200cm	0.250000
LOWER IN depth (soil) 20-30cm	0.166667
permafrost active layer	0.166667
LOWER IN depth 100-150cm	0.083333
LOWER IN depth 150-200cm	0.083333
LOWER IN permafrost transition layer	0.083333
LOWER IN depth (soil) 0-20cm	0.083333
permafrost transition layer	0.083333

Number of experiments associating the term to the sequence

Term	Score
kingdom of norway	1.000000
svalbard archipelago	1.000000
permafrost	1.000000
soil	1.000000
depth (soil) 20-30cm	1.000000
LOWER IN depth 100-150cm	1.000000
LOWER IN depth 150-200cm	1.000000
LOWER IN permafrost transition layer	1.000000
LOWER IN depth (soil) 0-20cm	1.000000
permafrost transition layer	1.000000
LOWER IN depth (soil) 20-30cm	1.000000
depth (soil) 0-20cm	1.000000
permafrost active layer	1.000000
depth 100-150cm	1.000000
depth 150-200cm	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 100-150cm	2018-07-15	v4	1 / 6	approved	No
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 150-200cm	2018-07-15	v4	1 / 6	approved	No
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth (soil) 20-30cm	2018-07-15	v4	1 / 10	approved	No
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, permafrost active layer, depth (soil) 0-20cm	2018-07-15	v4	1 / 11	approved	No
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth 150-200cm	2018-07-15	v4	1 / 126	approved	No
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth 100-150cm	2018-07-15	v4	1 / 173	approved	No
347	amnon	high in depth 100-150cm depth 150-200cm compared to depth (soil) 20-30cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	1 / 221	approved	No
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, permafrost active layer, depth (soil) 0-20cm	2018-07-15	v4	1 / 405	approved	No
347	amnon	high in permafrost transition layer depth (soil) 0-20cm compared to depth (soil) 20-30cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	1 / 477	approved	No
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth (soil) 20-30cm	2018-07-15	v4	1 / 698	approved	No
347	amnon	high in depth (soil) 20-30cm compared to permafrost transition layer depth (soil) 0-20cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	1 / 788	approved	No
347	amnon	high in depth (soil) 20-30cm compared to depth 100-150cm depth 150-200cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	1 / 1080	approved	No

Problems / suggestions? Please visit the dbBact forum