Experiment ID: 344

Field Description
namefecal microbiota composition drives immune activation in hiv-infected individuals
sraerp107331
qiita11669
datamd5efa1c629f6e01e4e940891da97e78f24
mapmd505dae389291080621e410c030534fd4a

Annotations for experiment:

term enrichment score
TermScore
denver0.500000
gay0.232558
heterosexual0.171429
msw0.171429
LOWER IN gay0.133333
homosexual0.120482
msm0.120482
LOWER IN heterosexual0.117647
LOWER IN msw0.117647
LOWER IN msm0.117647
LOWER IN homosexual0.117647
state of colorado0.100000
LOWER IN hiv infection0.080000
hiv infection0.068966
LOWER IN control0.004474
control0.004376
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
denver0.333333
gay0.142857
LOWER IN gay0.142857
LOWER IN heterosexual0.111111
LOWER IN msw0.111111
heterosexual0.111111
msw0.111111
LOWER IN msm0.111111
LOWER IN homosexual0.111111
homosexual0.066667
msm0.066667
LOWER IN hiv infection0.058824
state of colorado0.052632
hiv infection0.047619
LOWER IN control0.002278
control0.002227
united states of america0.001669
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
united states of america1.000000
state of colorado1.000000
denver1.000000
homosexual0.625000
msm0.625000
gay0.625000
heterosexual0.375000
msw0.375000
LOWER IN heterosexual0.125000
LOWER IN msw0.125000
LOWER IN gay0.125000
LOWER IN msm0.125000
LOWER IN homosexual0.125000
hiv infection0.125000
LOWER IN control0.125000
control0.125000
LOWER IN hiv infection0.125000
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
feces1.000000
united states of america1.000000
state of colorado1.000000
denver1.000000
homosexual1.000000
msm1.000000
gay1.000000
LOWER IN heterosexual1.000000
LOWER IN msw1.000000
heterosexual1.000000
msw1.000000
LOWER IN gay1.000000
LOWER IN msm1.000000
LOWER IN homosexual1.000000
hiv infection1.000000
LOWER IN control1.000000
control1.000000
LOWER IN hiv infection1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
344amnon high in control compared to hiv infection in homo sapiens feces united states of america state of colorado denver homosexual gay msm 2018-05-31v41 / 2approvedNo
344amnon high in hiv infection compared to control in homo sapiens feces united states of america state of colorado denver homosexual gay msm 2018-05-31v41 / 6approvedNo
344amnonhigh freq. in feces of homosexual males (dominant homo sapiens, feces, united states of america, state of colorado, denver, homosexual, gay, msm)2018-05-31v41 / 20approvedNo
344amnonhigh freq. in feces of heterosexuals (dominant homo sapiens, feces, united states of america, state of colorado, denver, heterosexual, msw)2018-05-31v41 / 23approvedNo
344amnoncommon in feces of heterosexuals (common homo sapiens, feces, united states of america, state of colorado, denver, heterosexual, msw)2018-05-31v41 / 82approvedNo
344amnoncommon in feces of homosexual males (common homo sapiens, feces, united states of america, state of colorado, denver, homosexual, gay, msm)2018-05-31v41 / 87approvedNo
344amnonlower in gay (msm) individuals compared to heterosexual (msw) ( high in heterosexual msw compared to gay msm homosexual in homo sapiens feces united states of america state of colorado denver )2018-05-31v41 / 106approvedNo
344amnonhigher in gay (msm) individuals compared to heterosexual (msw) ( high in homosexual msm gay compared to heterosexual msw in homo sapiens feces united states of america state of colorado denver )2018-05-31v41 / 124approvedNo

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