Experiment ID: 323

Field Description
namemicrobial community richness distinguishes shark species microbiomes in south florida
sraprjna393438
datamd50899fa026fee770d20ff4b3d47ac270d
mapmd5dc3e642be0816011cb9334b8167f3f50

Annotations for experiment:

term enrichment score
TermScore
south florida0.500000
shark0.468085
depth (water) 0cm0.206897
anal canal0.166667
gill0.146341
LOWER IN shark0.117647
LOWER IN depth (water) 0cm0.095238
LOWER IN gill0.095238
LOWER IN surface water0.086957
atlantic ocean0.083333
LOWER IN skin0.064516
LOWER IN dentition0.057143
surface water0.053097
LOWER IN water0.051282
state of florida0.050000
LOWER IN sea water0.048780
depth (soil) 0-20cm0.043478
dentition0.035928
sea water0.022305
skin0.022305
water0.017595
united states of america0.003333
Fraction of dbbact annotations with this term covered by the query
TermScore
south florida0.333333
LOWER IN shark0.333333
shark0.333333
depth (water) 0cm0.200000
anal canal0.200000
LOWER IN depth (water) 0cm0.142857
LOWER IN gill0.142857
gill0.111111
LOWER IN surface water0.111111
LOWER IN skin0.058824
LOWER IN dentition0.047619
atlantic ocean0.043478
LOWER IN water0.040000
LOWER IN sea water0.037037
surface water0.030303
state of florida0.025641
depth (soil) 0-20cm0.025641
dentition0.019608
sea water0.011765
skin0.011765
water0.009174
united states of america0.001669
Fraction of annotations for the query sequences containing the term
TermScore
atlantic ocean1.000000
south florida1.000000
state of florida1.000000
united states of america1.000000
shark0.785714
water0.214286
surface water0.214286
depth (water) 0cm0.214286
sea water0.214286
skin0.214286
gill0.214286
dentition0.214286
depth (soil) 0-20cm0.142857
anal canal0.142857
LOWER IN shark0.071429
LOWER IN water0.071429
LOWER IN surface water0.071429
LOWER IN depth (water) 0cm0.071429
LOWER IN sea water0.071429
LOWER IN dentition0.071429
LOWER IN skin0.071429
LOWER IN gill0.071429
Number of experiments associating the term to the sequence
TermScore
atlantic ocean1.000000
south florida1.000000
state of florida1.000000
united states of america1.000000
water1.000000
surface water1.000000
LOWER IN shark1.000000
depth (water) 0cm1.000000
sea water1.000000
depth (soil) 0-20cm1.000000
shark1.000000
skin1.000000
gill1.000000
anal canal1.000000
dentition1.000000
LOWER IN water1.000000
LOWER IN surface water1.000000
LOWER IN depth (water) 0cm1.000000
LOWER IN sea water1.000000
LOWER IN dentition1.000000
LOWER IN skin1.000000
LOWER IN gill1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
323amnondominant water, atlantic ocean, south florida, state of florida, united states of america, surface water, sea water, depth (soil) 0-20cm, depth (water) 0cm2018-04-24v41 / 12approvedNo
323amnonhigh freq. in shark cloaca (dominant atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v41 / 12approvedNo
323amnonhigh freq. in shark skin (dominant atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v41 / 13approvedNo
323amnonhigh freq. in shark gills (dominant atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v41 / 15approvedNo
323amnonhigh freq. in shark teeth (dominant atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v41 / 19approvedNo
323amnonhigher in teeth compared to skin and gills in sharks ( high in dentition compared to skin gill in atlantic ocean south florida state of florida united states of america shark )2018-04-24v41 / 25approvedNo
323amnonlower in teeth compared to skin and gills in sharks ( high in gill skin compared to dentition in atlantic ocean south florida state of florida united states of america shark )2018-04-24v41 / 98approvedNo
323amnonhigher in sharks compared to sea water ( high in shark compared to water surface water depth (water) 0cm sea water in atlantic ocean south florida state of florida united states of america )2018-04-24v41 / 107approvedNo
323amnoncommon freq. in shark teeth (common atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v41 / 123approvedNo
323amnoncommon in shark cloaca (common atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v41 / 167approvedNo
323amnoncommon in shark gills (common atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v41 / 170approvedNo
323amnoncommon in shark skin (common atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v41 / 213approvedNo
323amnoncommon water, atlantic ocean, south florida, state of florida, united states of america, surface water, sea water, depth (soil) 0-20cm, depth (water) 0cm2018-04-24v41 / 504approvedNo
323amnonlower in sharks compared to sea water ( high in water surface water depth (water) 0cm sea water compared to shark in atlantic ocean south florida state of florida united states of america )2018-04-24v41 / 979approvedNo

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