Experiment ID: 2588

Field Description
namegut microbial composition and predicted functions are not associated with feather pecking and antagonistic behavior in laying hens (8001194) - gpt-5
proj_id8001194
sraprjeb40535
date_of_upload17/03/2026 22:35
doi10.3390/life11030235
modelgpt-5
sample_groups_version18
dbbact_id808
dbbact_linkhttps://dbbact.org/exp_info/808
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
35 weeks0.666667
stuttgart0.666667
mucosa0.285714
digesta0.222222
LOWER IN digesta0.181818
LOWER IN mucosa0.166667
female organism0.100000
ileum0.095238
LOWER IN ileum0.086957
gallus gallus0.086957
germany0.076923
LOWER IN caecum0.074074
caecum0.038462
Fraction of dbbact annotations with this term covered by the query
TermScore
35 weeks0.500000
stuttgart0.500000
LOWER IN digesta0.333333
LOWER IN mucosa0.250000
mucosa0.200000
digesta0.142857
LOWER IN ileum0.066667
female organism0.052632
ileum0.052632
LOWER IN caecum0.052632
gallus gallus0.045455
germany0.040000
caecum0.020000
Fraction of annotations for the query sequences containing the term
TermScore
35 weeks1.000000
laying hen line high feather pecking1.000000
laying hen line low feather pecking1.000000
stuttgart1.000000
gallus gallus1.000000
laying hen1.000000
female organism1.000000
germany1.000000
poultry housing1.000000
caecum0.500000
mucosa0.500000
digesta0.500000
ileum0.500000
LOWER IN ileum0.125000
LOWER IN digesta0.125000
LOWER IN caecum0.125000
LOWER IN mucosa0.125000
Number of experiments associating the term to the sequence
TermScore
caecum1.000000
LOWER IN ileum1.000000
mucosa1.000000
35 weeks1.000000
laying hen line high feather pecking1.000000
laying hen line low feather pecking1.000000
stuttgart1.000000
gallus gallus1.000000
laying hen1.000000
female organism1.000000
germany1.000000
poultry housing1.000000
digesta1.000000
LOWER IN digesta1.000000
ileum1.000000
LOWER IN caecum1.000000
LOWER IN mucosa1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2588gpt-5Chicken caeca digesta samples (dominant caecum, 35 weeks, digesta, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing)2026-03-17v11 / 10pendingNo
2588gpt-5Chicken caeca mucosa samples (dominant mucosa, caecum, 35 weeks, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing)2026-03-17v11 / 11pendingNo
2588gpt-5Chicken ileum mucosa samples (dominant mucosa, 35 weeks, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing, ileum)2026-03-17v11 / 13pendingNo
2588gpt-5Chicken ileum digesta samples (dominant 35 weeks, digesta, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing, ileum)2026-03-17v11 / 15pendingNo
2588gpt-5Chicken ileum mucosa samples (common mucosa, 35 weeks, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing, ileum)2026-03-17v11 / 58pendingNo
2588gpt-5Chicken ileum digesta samples (common 35 weeks, digesta, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing, ileum)2026-03-17v11 / 72pendingNo
2588gpt-5Luminal (digesta) vs mucosa-associated microbiota within ileum ( high in digesta compared to mucosa in 35 weeks laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing ileum )2026-03-17v11 / 194pendingNo
2588gpt-5Ileum vs caeca microbiota in digesta (luminal communities differ along gut compartments) ( high in ileum compared to caecum in 35 weeks digesta laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing )2026-03-17v11 / 225pendingNo
2588gpt-5Luminal (digesta) vs mucosa-associated microbiota within caeca ( high in digesta compared to mucosa in caecum 35 weeks laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing )2026-03-17v11 / 276pendingNo
2588gpt-5Chicken caeca digesta samples (common caecum, 35 weeks, digesta, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing)2026-03-17v11 / 408pendingNo
2588gpt-5Chicken caeca mucosa samples (common mucosa, caecum, 35 weeks, laying hen line high feather pecking, laying hen line low feather pecking, stuttgart, gallus gallus, laying hen, female organism, germany, poultry housing)2026-03-17v11 / 446pendingNo
2588gpt-5Ileum vs caeca microbiota in mucosa (adherent communities across gut sites) ( high in ileum compared to caecum in mucosa 35 weeks laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing )2026-03-17v11 / 596pendingNo
2588gpt-5Luminal (digesta) vs mucosa-associated microbiota within caeca ( high in mucosa compared to digesta in caecum 35 weeks laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing )2026-03-17v11 / 706pendingNo
2588gpt-5Luminal (digesta) vs mucosa-associated microbiota within ileum ( high in mucosa compared to digesta in 35 weeks laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing ileum )2026-03-17v11 / 1364pendingNo
2588gpt-5Ileum vs caeca microbiota in digesta (luminal communities differ along gut compartments) ( high in caecum compared to ileum in 35 weeks digesta laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing )2026-03-17v11 / 1794pendingNo
2588gpt-5Ileum vs caeca microbiota in mucosa (adherent communities across gut sites) ( high in caecum compared to ileum in mucosa 35 weeks laying hen line high feather pecking laying hen line low feather pecking stuttgart gallus gallus laying hen female organism germany poultry housing )2026-03-17v11 / 2154pendingNo

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