Experiment ID: 2572

Field Description
nameevolution of rumen and oral microbiota in calves is influenced by age and time of weaning (8059317) - gpt-5
proj_id8059317
sraprjeb41435
date_of_upload17/03/2026 19:06
doi10.1186/s42523-021-00095-3
modelgpt-5
sample_groups_version18
dbbact_id910
dbbact_linkhttps://dbbact.org/exp_info/910
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
buccal mucosa0.133333
LOWER IN buccal mucosa0.133333
LOWER IN oral cavity0.117647
LOWER IN mouth mucosa0.105263
LOWER IN rumen0.105263
LOWER IN mouth0.105263
mouth mucosa0.086957
bos taurus0.052632
female organism0.052632
oral cavity0.048780
germany0.040000
mouth0.039216
rumen0.036364
farm0.023256
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN buccal mucosa0.111111
LOWER IN oral cavity0.090909
LOWER IN mouth mucosa0.076923
buccal mucosa0.076923
LOWER IN rumen0.076923
LOWER IN mouth0.076923
mouth mucosa0.047619
bos taurus0.027027
female organism0.027027
oral cavity0.025641
mouth0.020408
germany0.020408
rumen0.018868
farm0.011765
Fraction of annotations for the query sequences containing the term
TermScore
weaning1.000000
braunschweig1.000000
bos taurus1.000000
holstein breed1.000000
germany1.000000
farm1.000000
female organism1.000000
day 1400.500000
rumen0.500000
mouth0.500000
buccal mucosa0.500000
oral cavity0.500000
mouth mucosa0.500000
LOWER IN buccal mucosa0.166667
LOWER IN oral cavity0.166667
LOWER IN mouth mucosa0.166667
LOWER IN day 1400.166667
LOWER IN rumen0.166667
LOWER IN mouth0.166667
Number of experiments associating the term to the sequence
TermScore
day 1401.000000
rumen1.000000
mouth1.000000
LOWER IN buccal mucosa1.000000
LOWER IN oral cavity1.000000
LOWER IN mouth mucosa1.000000
weaning1.000000
braunschweig1.000000
bos taurus1.000000
holstein breed1.000000
germany1.000000
farm1.000000
female organism1.000000
buccal mucosa1.000000
oral cavity1.000000
mouth mucosa1.000000
LOWER IN day 1401.000000
LOWER IN rumen1.000000
LOWER IN mouth1.000000

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