Experiment ID: 2536

Field Description
namesuccession of rumen microbiota and metabolites across different reproductive periods in different sheep breeds and their impact on the growth and development of offspring lambs (11397069) - gpt-5
proj_id11397069
sraprjna1060421
date_of_upload17/03/2026 17:12
doi10.1186/s40168-024-01892-z
modelgpt-5
sample_groups_version18
dbbact_id1115
dbbact_linkhttps://dbbact.org/exp_info/1115
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
suffolk sheep0.551724
hu sheep0.434783
LOWER IN hu sheep0.235294
LOWER IN suffolk sheep0.235294
LOWER IN pregnancy0.210526
pregnancy0.116505
ovis aries0.111111
female organism0.100000
rumen0.071429
farm0.045455
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
suffolk sheep0.500000
hu sheep0.500000
LOWER IN hu sheep0.500000
LOWER IN suffolk sheep0.500000
LOWER IN pregnancy0.333333
pregnancy0.066667
ovis aries0.058824
female organism0.052632
rumen0.037037
farm0.023256
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
ovis aries1.000000
china1.000000
farm1.000000
lanzhou city prefecture1.000000
rumen1.000000
female organism1.000000
gansu province1.000000
suffolk sheep0.615385
lactation0.461538
pregnancy0.461538
non-pregnancy period0.423077
hu sheep0.384615
LOWER IN hu sheep0.153846
LOWER IN pregnancy0.153846
LOWER IN suffolk sheep0.153846
LOWER IN lactation0.153846
LOWER IN non-pregnancy period0.115385
Number of experiments associating the term to the sequence
TermScore
ovis aries1.000000
china1.000000
suffolk sheep1.000000
farm1.000000
lanzhou city prefecture1.000000
lactation1.000000
rumen1.000000
female organism1.000000
gansu province1.000000
hu sheep1.000000
non-pregnancy period1.000000
pregnancy1.000000
LOWER IN hu sheep1.000000
LOWER IN pregnancy1.000000
LOWER IN suffolk sheep1.000000
LOWER IN lactation1.000000
LOWER IN non-pregnancy period1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2536gpt-5Hu sheep rumen samples - non-pregnancy period (dominant ovis aries, china, hu sheep, non-pregnancy period, farm, lanzhou city prefecture, female organism, rumen, gansu province)2026-03-17v31 / 6pendingNo
2536gpt-5Suffolk rumen samples - lactation period (dominant ovis aries, china, suffolk sheep, farm, lanzhou city prefecture, lactation, rumen, female organism, gansu province)2026-03-17v31 / 7pendingNo
2536gpt-5Hu sheep rumen samples - pregnancy period + Hu sheep rumen samples - lactation period (dominant ovis aries, china, hu sheep, rumen, farm, lanzhou city prefecture, female organism, lactation, pregnancy, gansu province)2026-03-17v31 / 8pendingNo
2536gpt-5Suffolk rumen samples - pregnancy period (dominant ovis aries, china, suffolk sheep, farm, lanzhou city prefecture, female organism, rumen, pregnancy, gansu province)2026-03-17v31 / 9pendingNo
2536gpt-5Suffolk rumen samples - non-pregnancy period (dominant ovis aries, china, suffolk sheep, non-pregnancy period, farm, lanzhou city prefecture, female organism, rumen, gansu province)2026-03-17v31 / 11pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Suffolk sheep (pregnancy vs lactation) ( high in pregnancy compared to lactation in ovis aries china suffolk sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 11pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Suffolk sheep (pregnancy vs lactation) ( high in lactation compared to pregnancy in ovis aries china suffolk sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 15pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Suffolk sheep (non-pregnancy vs pregnancy) ( high in pregnancy compared to non-pregnancy period in ovis aries china suffolk sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 18pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Suffolk sheep (non-pregnancy vs pregnancy) ( high in non-pregnancy period compared to pregnancy in ovis aries china suffolk sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 31pendingNo
2536gpt-5Breed effect during non-pregnancy (Hu vs Suffolk) ( high in suffolk sheep compared to hu sheep in ovis aries china female organism non-pregnancy period lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 62pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Hu sheep (non-pregnancy vs pregnancy) ( high in lactation pregnancy compared to non-pregnancy period in ovis aries china hu sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 65pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Suffolk sheep (non-pregnancy vs lactation) ( high in non-pregnancy period compared to lactation in ovis aries china suffolk sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 71pendingNo
2536gpt-5Breed effect during non-pregnancy (Hu vs Suffolk) ( high in hu sheep compared to suffolk sheep in ovis aries china female organism non-pregnancy period lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 114pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Suffolk sheep (non-pregnancy vs lactation) ( high in lactation compared to non-pregnancy period in ovis aries china suffolk sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 124pendingNo
2536gpt-5Breed effect during pregnancy (Hu vs Suffolk) ( high in lactation hu sheep compared to suffolk sheep in ovis aries china female organism lanzhou city prefecture farm rumen pregnancy gansu province )2026-03-17v31 / 146pendingNo
2536gpt-5Effect of physiological stage on rumen microbiome in Hu sheep (non-pregnancy vs pregnancy) ( high in non-pregnancy period compared to lactation pregnancy in ovis aries china hu sheep female organism lanzhou city prefecture farm rumen gansu province )2026-03-17v31 / 166pendingNo
2536gpt-5Breed effect during pregnancy (Hu vs Suffolk) ( high in suffolk sheep compared to lactation hu sheep in ovis aries china female organism lanzhou city prefecture farm rumen pregnancy gansu province )2026-03-17v31 / 183pendingNo
2536gpt-5Breed effect during lactation (Hu vs Suffolk) ( high in hu sheep pregnancy compared to suffolk sheep in ovis aries china female organism lanzhou city prefecture farm lactation rumen gansu province )2026-03-17v31 / 247pendingNo
2536gpt-5Combined breed differences across reproductive stages (Hu vs Suffolk) ( high in suffolk sheep compared to hu sheep in ovis aries china female organism non-pregnancy period lanzhou city prefecture farm lactation rumen pregnancy gansu province )2026-03-17v31 / 324pendingNo
2536gpt-5Combined breed differences across reproductive stages (Hu vs Suffolk) ( high in hu sheep compared to suffolk sheep in ovis aries china female organism non-pregnancy period lanzhou city prefecture farm lactation rumen pregnancy gansu province )2026-03-17v31 / 347pendingNo
2536gpt-5Breed effect during lactation (Hu vs Suffolk) ( high in suffolk sheep compared to hu sheep pregnancy in ovis aries china female organism lanzhou city prefecture farm lactation rumen gansu province )2026-03-17v31 / 543pendingNo
2536gpt-5Suffolk rumen samples - non-pregnancy period (common ovis aries, china, suffolk sheep, non-pregnancy period, farm, lanzhou city prefecture, female organism, rumen, gansu province)2026-03-17v31 / 855pendingNo
2536gpt-5Hu sheep rumen samples - pregnancy period + Hu sheep rumen samples - lactation period (common ovis aries, china, hu sheep, rumen, farm, lanzhou city prefecture, female organism, lactation, pregnancy, gansu province)2026-03-17v31 / 860pendingNo
2536gpt-5Suffolk rumen samples - pregnancy period (common ovis aries, china, suffolk sheep, farm, lanzhou city prefecture, female organism, rumen, pregnancy, gansu province)2026-03-17v31 / 997pendingNo
2536gpt-5Hu sheep rumen samples - non-pregnancy period (common ovis aries, china, hu sheep, non-pregnancy period, farm, lanzhou city prefecture, female organism, rumen, gansu province)2026-03-17v31 / 1157pendingNo
2536gpt-5Suffolk rumen samples - lactation period (common ovis aries, china, suffolk sheep, farm, lanzhou city prefecture, lactation, rumen, female organism, gansu province)2026-03-17v31 / 1221pendingNo

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