Experiment ID: 2511

Field Description
nameincrease in bifidobacterium is a characteristic of the difference in the salivary microbiota of pregnant and non-pregnant women (9238123) - gpt-5
proj_id9238123
sraprjdb9791
date_of_upload17/03/2026 16:52
doi10.1186/s12903-022-02293-0
modelgpt-5
sample_groups_version18
dbbact_id918
dbbact_linkhttps://dbbact.org/exp_info/918
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
hokkaido0.500000
35 weeks0.500000
age 35 weeks0.500000
third trimester pregnancy stage0.333333
LOWER IN 35 weeks0.285714
LOWER IN third trimester pregnancy stage0.250000
LOWER IN age 35 weeks0.250000
LOWER IN pregnancy0.222222
pregnancy0.117647
female organism0.100000
japan0.080000
human adult stage0.045455
saliva0.029412
LOWER IN control0.008850
control0.008811
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN 35 weeks1.000000
35 weeks0.500000
age 35 weeks0.500000
LOWER IN third trimester pregnancy stage0.500000
LOWER IN age 35 weeks0.500000
hokkaido0.333333
LOWER IN pregnancy0.333333
third trimester pregnancy stage0.250000
pregnancy0.066667
female organism0.052632
japan0.041667
human adult stage0.023256
saliva0.014925
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
hokkaido1.000000
human adult stage1.000000
stomodeum1.000000
saliva1.000000
japan1.000000
kagoshima-shi1.000000
female organism1.000000
35 weeks0.500000
third trimester0.500000
pregnancy0.500000
third trimester pregnancy stage0.500000
age 35 weeks0.500000
menstruation0.500000
control0.500000
LOWER IN control0.166667
LOWER IN menstruation0.166667
LOWER IN 35 weeks0.166667
LOWER IN third trimester0.166667
LOWER IN pregnancy0.166667
LOWER IN third trimester pregnancy stage0.166667
LOWER IN age 35 weeks0.166667
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
hokkaido1.000000
35 weeks1.000000
human adult stage1.000000
third trimester1.000000
pregnancy1.000000
stomodeum1.000000
third trimester pregnancy stage1.000000
saliva1.000000
japan1.000000
kagoshima-shi1.000000
age 35 weeks1.000000
female organism1.000000
menstruation1.000000
control1.000000
LOWER IN control1.000000
LOWER IN menstruation1.000000
LOWER IN 35 weeks1.000000
LOWER IN third trimester1.000000
LOWER IN pregnancy1.000000
LOWER IN third trimester pregnancy stage1.000000
LOWER IN age 35 weeks1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2511gpt-5Pregnant vs non-pregnant women salivary microbiome (same host, body site, and method) ( high in control menstruation compared to 35 weeks third trimester pregnancy third trimester pregnancy stage age 35 weeks in homo sapiens female organism hokkaido human adult stage stomodeum kagoshima-shi saliva japan )2026-03-17v31 / 16pendingNo
2511gpt-5Pregnant women salivary microbiome samples (dominant homo sapiens, hokkaido, 35 weeks, human adult stage, third trimester, pregnancy, stomodeum, third trimester pregnancy stage, saliva, japan, kagoshima-shi, age 35 weeks, female organism)2026-03-17v31 / 21pendingNo
2511gpt-5Non-pregnant women salivary microbiome samples (dominant homo sapiens, hokkaido, menstruation, human adult stage, stomodeum, kagoshima-shi, saliva, japan, female organism, control)2026-03-17v31 / 22pendingNo
2511gpt-5Pregnant vs non-pregnant women salivary microbiome (same host, body site, and method) ( high in 35 weeks third trimester pregnancy third trimester pregnancy stage age 35 weeks compared to control menstruation in homo sapiens female organism hokkaido human adult stage stomodeum kagoshima-shi saliva japan )2026-03-17v31 / 40pendingNo
2511gpt-5Non-pregnant women salivary microbiome samples (common homo sapiens, hokkaido, menstruation, human adult stage, stomodeum, kagoshima-shi, saliva, japan, female organism, control)2026-03-17v31 / 93pendingNo
2511gpt-5Pregnant women salivary microbiome samples (common homo sapiens, hokkaido, 35 weeks, human adult stage, third trimester, pregnancy, stomodeum, third trimester pregnancy stage, saliva, japan, kagoshima-shi, age 35 weeks, female organism)2026-03-17v31 / 109pendingNo

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