Experiment ID: 2501

Field Description
namececal microbiome profile of hawaiian feral chickens and pasture-raised broiler (commercial) chickens determined using 16s rrna amplicon sequencing (8182230) - gpt-5
proj_id8182230
sraprjna644775
date_of_upload17/03/2026 16:20
doi10.1016/j.psj.2021.101181
modelgpt-5
sample_groups_version18
dbbact_id776
dbbact_linkhttps://dbbact.org/exp_info/776
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
ad libitum diet0.500000
age 15-20 weeks0.500000
feral0.500000
pasture0.400000
LOWER IN ad libitum diet0.285714
LOWER IN chicken0.285714
LOWER IN age 15-20 weeks0.250000
LOWER IN feral0.250000
LOWER IN pasture0.250000
LOWER IN broiler chicken0.200000
broiler chicken0.181818
LOWER IN wild0.095238
gallus gallus0.086957
chicken0.086957
wild0.051282
caecum0.039216
united states of america0.006645
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN ad libitum diet1.000000
LOWER IN chicken1.000000
ad libitum diet0.500000
LOWER IN age 15-20 weeks0.500000
LOWER IN feral0.500000
age 15-20 weeks0.500000
feral0.500000
LOWER IN pasture0.500000
pasture0.333333
LOWER IN broiler chicken0.250000
broiler chicken0.111111
LOWER IN wild0.066667
chicken0.047619
gallus gallus0.045455
wild0.027027
caecum0.020000
united states of america0.003333
Exp. ID User ID Description Date Region Sequences Status Flag
2501gpt-5Commercial chicken cecal (gut) samples (dominant ad libitum diet, commercial diet, pasture, honolulu, united states of america, chicken, cornish rock, pasture-raised broiler, broiler chicken, animal facility, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 17pendingNo
2501gpt-5Feral chicken cecal (gut) samples (dominant age 15-20 weeks, scavenging feeding behavior, honolulu, united states of america, feral, wild, urban public location, habitat, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 26pendingNo
2501gpt-5Commercial vs feral chickens (cecal microbiome differences due to domestication and management) ( high in age 15-20 weeks scavenging feeding behavior feral wild urban public location habitat compared to ad libitum diet commercial diet pasture chicken cornish rock pasture-raised broiler broiler chicken animal facility in caecum honolulu state of hawaii gallus gallus united states of america )2026-03-17v31 / 105pendingNo
2501gpt-5Feral chicken cecal (gut) samples (common age 15-20 weeks, scavenging feeding behavior, honolulu, united states of america, feral, wild, urban public location, habitat, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 191pendingNo
2501gpt-5Commercial vs feral chickens (cecal microbiome differences due to domestication and management) ( high in ad libitum diet commercial diet pasture chicken cornish rock pasture-raised broiler broiler chicken animal facility compared to age 15-20 weeks scavenging feeding behavior feral wild urban public location habitat in caecum honolulu state of hawaii gallus gallus united states of america )2026-03-17v31 / 267pendingNo
2501gpt-5Commercial chicken cecal (gut) samples (common ad libitum diet, commercial diet, pasture, honolulu, united states of america, chicken, cornish rock, pasture-raised broiler, broiler chicken, animal facility, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 343pendingNo

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