Experiment ID: 2501

Field Description
namececal microbiome profile of hawaiian feral chickens and pasture-raised broiler (commercial) chickens determined using 16s rrna amplicon sequencing (8182230) - gpt-5
proj_id8182230
sraprjna644775
date_of_upload17/03/2026 16:20
doi10.1016/j.psj.2021.101181
modelgpt-5
sample_groups_version18
dbbact_id776
dbbact_linkhttps://dbbact.org/exp_info/776
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
ad libitum diet0.400000
age 15-20 weeks0.400000
feral0.400000
pasture0.285714
LOWER IN ad libitum diet0.285714
LOWER IN chicken0.285714
LOWER IN age 15-20 weeks0.222222
LOWER IN feral0.222222
LOWER IN pasture0.222222
LOWER IN broiler chicken0.153846
broiler chicken0.105263
LOWER IN wild0.057143
chicken0.046512
gallus gallus0.045455
wild0.026667
caecum0.020000
united states of america0.003333
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN ad libitum diet1.000000
LOWER IN chicken1.000000
ad libitum diet0.333333
LOWER IN age 15-20 weeks0.333333
LOWER IN feral0.333333
age 15-20 weeks0.333333
feral0.333333
LOWER IN pasture0.333333
pasture0.200000
LOWER IN broiler chicken0.142857
broiler chicken0.058824
LOWER IN wild0.034483
chicken0.024390
gallus gallus0.023256
wild0.013699
caecum0.010101
united states of america0.001669
Exp. ID User ID Description Date Region Sequences Status Flag
2501gpt-5Commercial chicken cecal (gut) samples (dominant ad libitum diet, commercial diet, pasture, honolulu, united states of america, chicken, cornish rock, pasture-raised broiler, broiler chicken, animal facility, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 17pendingNo
2501gpt-5Feral chicken cecal (gut) samples (dominant age 15-20 weeks, scavenging feeding behavior, honolulu, united states of america, feral, wild, urban public location, habitat, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 26pendingNo
2501gpt-5Commercial vs feral chickens (cecal microbiome differences due to domestication and management) ( high in age 15-20 weeks scavenging feeding behavior feral wild urban public location habitat compared to ad libitum diet commercial diet pasture chicken cornish rock pasture-raised broiler broiler chicken animal facility in caecum honolulu state of hawaii gallus gallus united states of america )2026-03-17v31 / 105pendingNo
2501gpt-5Feral chicken cecal (gut) samples (common age 15-20 weeks, scavenging feeding behavior, honolulu, united states of america, feral, wild, urban public location, habitat, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 191pendingNo
2501gpt-5Commercial vs feral chickens (cecal microbiome differences due to domestication and management) ( high in ad libitum diet commercial diet pasture chicken cornish rock pasture-raised broiler broiler chicken animal facility compared to age 15-20 weeks scavenging feeding behavior feral wild urban public location habitat in caecum honolulu state of hawaii gallus gallus united states of america )2026-03-17v31 / 267pendingNo
2501gpt-5Commercial chicken cecal (gut) samples (common ad libitum diet, commercial diet, pasture, honolulu, united states of america, chicken, cornish rock, pasture-raised broiler, broiler chicken, animal facility, state of hawaii, gallus gallus, caecum)2026-03-17v31 / 343pendingNo

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