Experiment ID: 2496

Field Description
namebenchmark of 16s rrna gene amplicon sequencing using japanese gut microbiome data from the v1–v2 and v3–v4 primer sets (8272389) - gpt-5
proj_id8272389
sraprjna715083
date_of_upload17/03/2026 16:09
doi10.1186/s12864-021-07746-4
modelgpt-5
sample_groups_version18
dbbact_id834
dbbact_linkhttps://dbbact.org/exp_info/834
needs_manual_reviewfalse

Annotations for experiment:

term enrichment score
TermScore
japan0.080000
human adult stage0.045455
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
japan0.041667
human adult stage0.023256
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
healthy1.000000
feces1.000000
homo sapiens1.000000
human house1.000000
japan1.000000
human adult stage1.000000
v3–v4 region0.500000
v1–v2 region0.500000
LOWER IN v1–v2 region0.166667
LOWER IN v3–v4 region0.166667
Number of experiments associating the term to the sequence
TermScore
v3–v4 region1.000000
LOWER IN v1–v2 region1.000000
healthy1.000000
feces1.000000
homo sapiens1.000000
human house1.000000
japan1.000000
human adult stage1.000000
v1–v2 region1.000000
LOWER IN v3–v4 region1.000000

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