Experiment ID: 2484

Field Description
namesalivary microbiomes of indigenous tsimane mothers and infants are distinct despite frequent premastication (5101600) - gpt-5
proj_id5101600
sraprjna320081
date_of_upload17/03/2026 15:55
doi10.7717/peerj.2660
modelgpt-5
sample_groups_version18
dbbact_id32
dbbact_linkhttps://dbbact.org/exp_info/32
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
bolivia0.400000
infant stage0.400000
breast fed0.333333
LOWER IN infant stage0.222222
LOWER IN human adult stage0.222222
dental caries0.200000
LOWER IN breast fed0.181818
LOWER IN dental caries0.142857
LOWER IN female organism0.133333
rural community0.111111
female organism0.095238
oral cavity0.095238
human adult stage0.044444
saliva0.029412
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN infant stage0.333333
infant stage0.333333
LOWER IN human adult stage0.333333
bolivia0.250000
breast fed0.250000
LOWER IN breast fed0.200000
dental caries0.125000
LOWER IN dental caries0.125000
LOWER IN female organism0.111111
rural community0.058824
female organism0.052632
oral cavity0.050000
human adult stage0.023256
saliva0.014925
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
oral cavity1.000000
tsimane population1.000000
bolivian amazon1.000000
bolivia1.000000
homo sapiens1.000000
premastication1.000000
rural community1.000000
saliva1.000000
gingivitis0.500000
female organism0.500000
human adult stage0.500000
caregiver0.500000
dental caries0.500000
breast fed0.500000
infant stage0.500000
LOWER IN infant stage0.166667
LOWER IN breast fed0.166667
LOWER IN female organism0.166667
LOWER IN gingivitis0.166667
LOWER IN human adult stage0.166667
LOWER IN caregiver0.166667
LOWER IN dental caries0.166667
Number of experiments associating the term to the sequence
TermScore
oral cavity1.000000
tsimane population1.000000
gingivitis1.000000
bolivian amazon1.000000
female organism1.000000
human adult stage1.000000
bolivia1.000000
caregiver1.000000
dental caries1.000000
homo sapiens1.000000
premastication1.000000
rural community1.000000
saliva1.000000
LOWER IN infant stage1.000000
LOWER IN breast fed1.000000
breast fed1.000000
infant stage1.000000
LOWER IN female organism1.000000
LOWER IN gingivitis1.000000
LOWER IN human adult stage1.000000
LOWER IN caregiver1.000000
LOWER IN dental caries1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2484gpt-5Tsimane infant vs mother salivary microbiome (vertical transmission and maturation) ( high in infant stage breast fed compared to female organism gingivitis human adult stage caregiver dental caries in oral cavity tsimane population bolivian amazon bolivia homo sapiens premastication rural community saliva )2026-03-17v41 / 3pendingNo
2484gpt-5Tsimane mother salivary microbiome samples (dominant oral cavity, tsimane population, gingivitis, bolivian amazon, female organism, human adult stage, bolivia, caregiver, dental caries, homo sapiens, premastication, rural community, saliva)2026-03-17v41 / 19pendingNo
2484gpt-5Tsimane infant salivary microbiome samples (dominant oral cavity, tsimane population, breast fed, bolivian amazon, infant stage, bolivia, homo sapiens, premastication, rural community, saliva)2026-03-17v41 / 21pendingNo
2484gpt-5Tsimane infant salivary microbiome samples (common oral cavity, tsimane population, breast fed, bolivian amazon, infant stage, bolivia, homo sapiens, premastication, rural community, saliva)2026-03-17v41 / 34pendingNo
2484gpt-5Tsimane infant vs mother salivary microbiome (vertical transmission and maturation) ( high in female organism gingivitis human adult stage caregiver dental caries compared to infant stage breast fed in oral cavity tsimane population bolivian amazon bolivia homo sapiens premastication rural community saliva )2026-03-17v41 / 56pendingNo
2484gpt-5Tsimane mother salivary microbiome samples (common oral cavity, tsimane population, gingivitis, bolivian amazon, female organism, human adult stage, bolivia, caregiver, dental caries, homo sapiens, premastication, rural community, saliva)2026-03-17v41 / 80pendingNo

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