Experiment ID: 2483

Field Description
nameage and sex-associated variation in the multi-site microbiome of an entire social group of free-ranging rhesus macaques (7986251) - gpt-5
proj_id7986251
sraprjna692377
date_of_upload17/03/2026 15:50
doi10.1186/s40168-021-01009-w
modelgpt-5
sample_groups_version18
dbbact_id770
dbbact_linkhttps://dbbact.org/exp_info/770
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
cayo santiago0.666667
skin of penis0.400000
LOWER IN skin of penis0.285714
macaca mulatta0.222222
LOWER IN rectal swab0.222222
LOWER IN vagina0.200000
buccal mucosa0.200000
LOWER IN buccal mucosa0.181818
LOWER IN oral cavity0.166667
LOWER IN rectum0.153846
rectum0.133333
vagina0.105263
rectal swab0.100000
oral cavity0.086957
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN skin of penis1.000000
cayo santiago0.500000
skin of penis0.500000
LOWER IN rectal swab0.333333
LOWER IN vagina0.250000
LOWER IN buccal mucosa0.200000
LOWER IN oral cavity0.166667
LOWER IN rectum0.142857
buccal mucosa0.142857
macaca mulatta0.125000
rectum0.083333
vagina0.062500
rectal swab0.058824
oral cavity0.050000
Fraction of annotations for the query sequences containing the term
TermScore
cayo santiago1.000000
commonwealth of puerto rico1.000000
provisioned diet1.000000
island1.000000
free-ranging1.000000
macaca mulatta1.000000
rectum0.333333
rectal swab0.333333
vagina0.333333
skin of penis0.333333
external genitalia0.333333
oral cavity0.333333
buccal mucosa0.333333
buccal swab0.333333
LOWER IN oral cavity0.166667
LOWER IN buccal mucosa0.166667
LOWER IN buccal swab0.166667
LOWER IN vagina0.166667
LOWER IN skin of penis0.166667
LOWER IN external genitalia0.166667
LOWER IN rectum0.166667
LOWER IN rectal swab0.166667
Number of experiments associating the term to the sequence
TermScore
rectum1.000000
rectal swab1.000000
LOWER IN oral cavity1.000000
LOWER IN buccal mucosa1.000000
LOWER IN buccal swab1.000000
cayo santiago1.000000
commonwealth of puerto rico1.000000
provisioned diet1.000000
island1.000000
free-ranging1.000000
macaca mulatta1.000000
vagina1.000000
skin of penis1.000000
external genitalia1.000000
LOWER IN vagina1.000000
LOWER IN skin of penis1.000000
LOWER IN external genitalia1.000000
LOWER IN rectum1.000000
LOWER IN rectal swab1.000000
oral cavity1.000000
buccal mucosa1.000000
buccal swab1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2483gpt-5Rhesus macaque genital microbiome samples (dominant cayo santiago, vagina, skin of penis, commonwealth of puerto rico, external genitalia, provisioned diet, island, free-ranging, macaca mulatta)2026-03-17v41 / 13pendingNo
2483gpt-5Rhesus macaque rectal (gut) microbiome samples (dominant cayo santiago, rectal swab, commonwealth of puerto rico, provisioned diet, island, rectum, free-ranging, macaca mulatta)2026-03-17v41 / 16pendingNo
2483gpt-5Rhesus macaque oral (buccal) microbiome samples (dominant oral cavity, cayo santiago, buccal swab, provisioned diet, commonwealth of puerto rico, island, buccal mucosa, free-ranging, macaca mulatta)2026-03-17v41 / 22pendingNo
2483gpt-5Rhesus macaque oral (buccal) microbiome samples (common oral cavity, cayo santiago, buccal swab, provisioned diet, commonwealth of puerto rico, island, buccal mucosa, free-ranging, macaca mulatta)2026-03-17v41 / 55pendingNo
2483gpt-5Rhesus macaque genital microbiome samples (common cayo santiago, vagina, skin of penis, commonwealth of puerto rico, external genitalia, provisioned diet, island, free-ranging, macaca mulatta)2026-03-17v41 / 139pendingNo
2483gpt-5Rhesus macaque rectal (gut) microbiome samples (common cayo santiago, rectal swab, commonwealth of puerto rico, provisioned diet, island, rectum, free-ranging, macaca mulatta)2026-03-17v41 / 338pendingNo
2483gpt-5Body-site differentiation of the rhesus macaque microbiome: oral vs genital ( high in oral cavity buccal mucosa buccal swab compared to vagina skin of penis external genitalia in cayo santiago commonwealth of puerto rico provisioned diet island free-ranging macaca mulatta )2026-03-17v41 / 340pendingNo
2483gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs oral ( high in oral cavity buccal mucosa buccal swab compared to rectum rectal swab in cayo santiago commonwealth of puerto rico provisioned diet island free-ranging macaca mulatta )2026-03-17v41 / 349pendingNo
2483gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs genital ( high in vagina skin of penis external genitalia compared to rectum rectal swab in cayo santiago commonwealth of puerto rico provisioned diet island free-ranging macaca mulatta )2026-03-17v41 / 370pendingNo
2483gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs genital ( high in rectum rectal swab compared to vagina skin of penis external genitalia in cayo santiago commonwealth of puerto rico provisioned diet island free-ranging macaca mulatta )2026-03-17v41 / 1202pendingNo
2483gpt-5Body-site differentiation of the rhesus macaque microbiome: oral vs genital ( high in vagina skin of penis external genitalia compared to oral cavity buccal mucosa buccal swab in cayo santiago commonwealth of puerto rico provisioned diet island free-ranging macaca mulatta )2026-03-17v41 / 1584pendingNo
2483gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs oral ( high in rectum rectal swab compared to oral cavity buccal mucosa buccal swab in cayo santiago commonwealth of puerto rico provisioned diet island free-ranging macaca mulatta )2026-03-17v41 / 1699pendingNo

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