Experiment ID: 2456

Field Description
namespatial structure of the microbiome in the gut of pomacea canaliculata (6896589) - gpt-5
proj_id6896589
srasrp200036
date_of_upload17/03/2026 15:20
doi10.1186/s12866-019-1661-x
modelgpt-5
sample_groups_version18
dbbact_id585
dbbact_linkhttps://dbbact.org/exp_info/585
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
freshwater biome0.666667
pomacea canaliculata0.666667
qingpu district0.500000
municipality of shanghai0.400000
crop0.400000
buccal mass0.400000
village0.333333
LOWER IN buccal mass0.250000
LOWER IN crop0.250000
LOWER IN intestine0.200000
river0.142857
LOWER IN stomach0.125000
female organism0.100000
stomach0.100000
intestine0.058824
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
freshwater biome0.500000
pomacea canaliculata0.500000
LOWER IN buccal mass0.500000
LOWER IN crop0.500000
crop0.500000
buccal mass0.500000
qingpu district0.333333
municipality of shanghai0.250000
LOWER IN intestine0.250000
village0.200000
LOWER IN stomach0.100000
river0.076923
stomach0.058824
female organism0.052632
intestine0.032258
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
wild-caught1.000000
starvation 24 hours1.000000
female organism1.000000
fresh water body1.000000
village1.000000
river1.000000
municipality of shanghai1.000000
freshwater biome1.000000
china1.000000
pomacea canaliculata1.000000
qingpu district1.000000
intestine0.333333
stomach0.333333
crop0.333333
buccal mass0.333333
LOWER IN buccal mass0.166667
LOWER IN crop0.166667
LOWER IN stomach0.166667
LOWER IN intestine0.166667
Number of experiments associating the term to the sequence
TermScore
wild-caught1.000000
starvation 24 hours1.000000
female organism1.000000
fresh water body1.000000
village1.000000
river1.000000
municipality of shanghai1.000000
freshwater biome1.000000
china1.000000
pomacea canaliculata1.000000
intestine1.000000
qingpu district1.000000
stomach1.000000
LOWER IN buccal mass1.000000
LOWER IN crop1.000000
crop1.000000
buccal mass1.000000
LOWER IN stomach1.000000
LOWER IN intestine1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2456gpt-5Gut region differentiation: crop (buccal mass) vs stomach microbiome in Pomacea canaliculata ( high in stomach compared to buccal mass crop in wild-caught starvation 24 hours fresh water body village river municipality of shanghai freshwater biome china female organism pomacea canaliculata qingpu district )2026-03-17v31 / 3pendingNo
2456gpt-5Gut region differentiation: crop (buccal mass) vs stomach microbiome in Pomacea canaliculata ( high in buccal mass crop compared to stomach in wild-caught starvation 24 hours fresh water body village river municipality of shanghai freshwater biome china female organism pomacea canaliculata qingpu district )2026-03-17v31 / 11pendingNo
2456gpt-5Proximal vs distal gut: stomach vs intestine microbiome in Pomacea canaliculata ( high in stomach compared to intestine in wild-caught starvation 24 hours fresh water body village river municipality of shanghai freshwater biome china female organism pomacea canaliculata qingpu district )2026-03-17v31 / 12pendingNo
2456gpt-5Pomacea canaliculata stomach microbiome samples (dominant wild-caught, starvation 24 hours, female organism, stomach, fresh water body, village, river, municipality of shanghai, freshwater biome, china, pomacea canaliculata, qingpu district)2026-03-17v31 / 14pendingNo
2456gpt-5Pomacea canaliculata buccal mass (crop) microbiome samples (dominant wild-caught, starvation 24 hours, female organism, fresh water body, crop, village, river, municipality of shanghai, freshwater biome, china, buccal mass, pomacea canaliculata, qingpu district)2026-03-17v31 / 16pendingNo
2456gpt-5Pomacea canaliculata intestine microbiome samples (dominant wild-caught, starvation 24 hours, female organism, fresh water body, village, river, municipality of shanghai, freshwater biome, china, pomacea canaliculata, intestine, qingpu district)2026-03-17v31 / 16pendingNo
2456gpt-5Upper vs lower gut: crop (buccal mass) vs intestine microbiome in Pomacea canaliculata ( high in buccal mass crop compared to intestine in wild-caught starvation 24 hours fresh water body village river municipality of shanghai freshwater biome china female organism pomacea canaliculata qingpu district )2026-03-17v31 / 23pendingNo
2456gpt-5Proximal vs distal gut: stomach vs intestine microbiome in Pomacea canaliculata ( high in intestine compared to stomach in wild-caught starvation 24 hours fresh water body village river municipality of shanghai freshwater biome china female organism pomacea canaliculata qingpu district )2026-03-17v31 / 31pendingNo
2456gpt-5Pomacea canaliculata buccal mass (crop) microbiome samples (common wild-caught, starvation 24 hours, female organism, fresh water body, crop, village, river, municipality of shanghai, freshwater biome, china, buccal mass, pomacea canaliculata, qingpu district)2026-03-17v31 / 136pendingNo
2456gpt-5Upper vs lower gut: crop (buccal mass) vs intestine microbiome in Pomacea canaliculata ( high in intestine compared to buccal mass crop in wild-caught starvation 24 hours fresh water body village river municipality of shanghai freshwater biome china female organism pomacea canaliculata qingpu district )2026-03-17v31 / 150pendingNo
2456gpt-5Pomacea canaliculata stomach microbiome samples (common wild-caught, starvation 24 hours, female organism, stomach, fresh water body, village, river, municipality of shanghai, freshwater biome, china, pomacea canaliculata, qingpu district)2026-03-17v31 / 205pendingNo
2456gpt-5Pomacea canaliculata intestine microbiome samples (common wild-caught, starvation 24 hours, female organism, fresh water body, village, river, municipality of shanghai, freshwater biome, china, pomacea canaliculata, intestine, qingpu district)2026-03-17v31 / 284pendingNo

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