Experiment ID: 2447

Field Description
namethe human gallbladder microbiome is related to the physiological state and the biliary metabolic profile (6610825) - gpt-5
proj_id6610825
srasrp136147
date_of_upload17/03/2026 15:15
doi10.1186/s40168-019-0712-8
modelgpt-5
sample_groups_version18
dbbact_id526
dbbact_linkhttps://dbbact.org/exp_info/526
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
bile0.666667
cholelithiasis0.500000
intensive care unit admission0.500000
LOWER IN hospital0.285714
LOWER IN intensive care unit admission0.250000
LOWER IN cholelithiasis0.250000
hospital0.166667
kingdom of spain0.074074
human adult stage0.045455
LOWER IN control0.008850
control0.008811
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN hospital1.000000
cholelithiasis0.500000
LOWER IN intensive care unit admission0.500000
bile0.500000
intensive care unit admission0.500000
LOWER IN cholelithiasis0.500000
hospital0.100000
kingdom of spain0.038462
human adult stage0.023256
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
kingdom of spain1.000000
homo sapiens1.000000
gall bladder1.000000
asturias autonomous community1.000000
bile1.000000
human adult stage1.000000
patient0.500000
cholelithiasis0.500000
gallstones0.500000
hospital0.500000
liver donor0.500000
control0.500000
intensive care unit admission0.500000
amoxicillin-clavulanic acid0.500000
LOWER IN liver donor0.166667
LOWER IN hospital0.166667
LOWER IN control0.166667
LOWER IN intensive care unit admission0.166667
LOWER IN amoxicillin-clavulanic acid0.166667
LOWER IN patient0.166667
LOWER IN cholelithiasis0.166667
LOWER IN gallstones0.166667
Number of experiments associating the term to the sequence
TermScore
patient1.000000
cholelithiasis1.000000
gallstones1.000000
LOWER IN liver donor1.000000
LOWER IN hospital1.000000
LOWER IN control1.000000
LOWER IN intensive care unit admission1.000000
LOWER IN amoxicillin-clavulanic acid1.000000
kingdom of spain1.000000
homo sapiens1.000000
gall bladder1.000000
asturias autonomous community1.000000
bile1.000000
human adult stage1.000000
hospital1.000000
liver donor1.000000
control1.000000
intensive care unit admission1.000000
amoxicillin-clavulanic acid1.000000
LOWER IN patient1.000000
LOWER IN cholelithiasis1.000000
LOWER IN gallstones1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2447gpt-5Cholelithiasis human bile samples (dominant kingdom of spain, homo sapiens, gall bladder, gallstones, asturias autonomous community, patient, bile, cholelithiasis, human adult stage)2026-03-17v31 / 8pendingNo
2447gpt-5Healthy donor human bile samples (dominant kingdom of spain, homo sapiens, gall bladder, asturias autonomous community, hospital, liver donor, control, bile, intensive care unit admission, human adult stage, amoxicillin-clavulanic acid)2026-03-17v31 / 16pendingNo
2447gpt-5Biliary microbiome in cholelithiasis vs healthy donors ( high in liver donor hospital control intensive care unit admission amoxicillin-clavulanic acid compared to patient cholelithiasis gallstones in kingdom of spain homo sapiens gall bladder asturias autonomous community bile human adult stage )2026-03-17v31 / 26pendingNo
2447gpt-5Healthy donor human bile samples (common kingdom of spain, homo sapiens, gall bladder, asturias autonomous community, hospital, liver donor, control, bile, intensive care unit admission, human adult stage, amoxicillin-clavulanic acid)2026-03-17v31 / 40pendingNo
2447gpt-5Cholelithiasis human bile samples (common kingdom of spain, homo sapiens, gall bladder, gallstones, asturias autonomous community, patient, bile, cholelithiasis, human adult stage)2026-03-17v31 / 166pendingNo
2447gpt-5Biliary microbiome in cholelithiasis vs healthy donors ( high in patient cholelithiasis gallstones compared to liver donor hospital control intensive care unit admission amoxicillin-clavulanic acid in kingdom of spain homo sapiens gall bladder asturias autonomous community bile human adult stage )2026-03-17v31 / 205pendingNo

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